Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2344 and Echvi_2345 are separated by 7 nucleotides Echvi_2345 and Echvi_2346 overlap by 1 nucleotides Echvi_2346 and Echvi_2347 are separated by 157 nucleotides
Echvi_2344: Echvi_2344 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase, at 2,781,460 to 2,783,142
_2344
Echvi_2345: Echvi_2345 - isochorismate synthases, at 2,783,150 to 2,784,352
_2345
Echvi_2346: Echvi_2346 - uncharacterized domain 1, at 2,784,352 to 2,784,777
_2346
Echvi_2347: Echvi_2347 - Fructose-2,6-bisphosphatase, at 2,784,935 to 2,785,567
_2347
Position (kb)
2783
2784
2785 Strain fitness (log2 ratio)
-2
-1
0
1 at 2784.305 kb on + strand at 2784.328 kb on - strand at 2784.535 kb on - strand, within Echvi_2346 at 2784.540 kb on - strand, within Echvi_2346 at 2784.557 kb on - strand, within Echvi_2346 at 2784.715 kb on + strand, within Echvi_2346 at 2784.845 kb on + strand at 2784.846 kb on - strand at 2784.943 kb on + strand at 2784.952 kb on - strand at 2784.981 kb on - strand at 2784.982 kb on + strand at 2784.983 kb on - strand at 2785.025 kb on - strand, within Echvi_2347 at 2785.073 kb on - strand, within Echvi_2347 at 2785.073 kb on - strand, within Echvi_2347 at 2785.079 kb on - strand, within Echvi_2347 at 2785.090 kb on + strand, within Echvi_2347 at 2785.097 kb on + strand, within Echvi_2347 at 2785.098 kb on - strand, within Echvi_2347 at 2785.098 kb on - strand, within Echvi_2347 at 2785.100 kb on + strand, within Echvi_2347 at 2785.101 kb on - strand, within Echvi_2347 at 2785.102 kb on + strand, within Echvi_2347 at 2785.102 kb on + strand, within Echvi_2347 at 2785.102 kb on + strand, within Echvi_2347 at 2785.117 kb on + strand, within Echvi_2347 at 2785.118 kb on - strand, within Echvi_2347 at 2785.160 kb on + strand, within Echvi_2347 at 2785.161 kb on - strand, within Echvi_2347 at 2785.223 kb on - strand, within Echvi_2347 at 2785.238 kb on + strand, within Echvi_2347 at 2785.238 kb on + strand, within Echvi_2347 at 2785.238 kb on + strand, within Echvi_2347 at 2785.239 kb on - strand, within Echvi_2347 at 2785.319 kb on + strand, within Echvi_2347 at 2785.348 kb on + strand, within Echvi_2347 at 2785.349 kb on - strand, within Echvi_2347 at 2785.349 kb on - strand, within Echvi_2347
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 2,784,305 + +1.0 2,784,328 - -0.3 2,784,535 - Echvi_2346 0.43 -0.7 2,784,540 - Echvi_2346 0.44 -1.2 2,784,557 - Echvi_2346 0.48 -0.1 2,784,715 + Echvi_2346 0.85 -1.1 2,784,845 + +1.0 2,784,846 - +0.2 2,784,943 + -0.1 2,784,952 - -1.2 2,784,981 - +0.2 2,784,982 + -1.0 2,784,983 - +0.0 2,785,025 - Echvi_2347 0.14 -2.4 2,785,073 - Echvi_2347 0.22 -0.1 2,785,073 - Echvi_2347 0.22 -0.1 2,785,079 - Echvi_2347 0.23 -1.5 2,785,090 + Echvi_2347 0.24 -0.2 2,785,097 + Echvi_2347 0.26 -1.1 2,785,098 - Echvi_2347 0.26 -1.4 2,785,098 - Echvi_2347 0.26 -0.3 2,785,100 + Echvi_2347 0.26 +0.0 2,785,101 - Echvi_2347 0.26 +0.1 2,785,102 + Echvi_2347 0.26 -1.8 2,785,102 + Echvi_2347 0.26 -1.2 2,785,102 + Echvi_2347 0.26 -0.1 2,785,117 + Echvi_2347 0.29 -0.3 2,785,118 - Echvi_2347 0.29 -0.7 2,785,160 + Echvi_2347 0.36 +0.4 2,785,161 - Echvi_2347 0.36 -0.6 2,785,223 - Echvi_2347 0.45 +0.2 2,785,238 + Echvi_2347 0.48 -0.7 2,785,238 + Echvi_2347 0.48 +0.8 2,785,238 + Echvi_2347 0.48 +1.4 2,785,239 - Echvi_2347 0.48 +0.1 2,785,319 + Echvi_2347 0.61 -0.6 2,785,348 + Echvi_2347 0.65 -1.2 2,785,349 - Echvi_2347 0.65 -1.3 2,785,349 - Echvi_2347 0.65 -0.0
Or see this region's nucleotide sequence