Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2264 and Echvi_2265 are separated by 10 nucleotides Echvi_2265 and Echvi_2266 are separated by 1 nucleotides
Echvi_2264: Echvi_2264 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,682,031 to 2,683,593
_2264
Echvi_2265: Echvi_2265 - ATPase, YjeE family, at 2,683,604 to 2,684,026
_2265
Echvi_2266: Echvi_2266 - Alanine dehydrogenase, at 2,684,028 to 2,685,245
_2266
Position (kb)
2683
2684
2685 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2682.612 kb on - strand, within Echvi_2264 at 2682.793 kb on + strand, within Echvi_2264 at 2682.793 kb on + strand, within Echvi_2264 at 2682.794 kb on - strand, within Echvi_2264 at 2682.820 kb on + strand, within Echvi_2264 at 2682.820 kb on + strand, within Echvi_2264 at 2682.820 kb on + strand, within Echvi_2264 at 2682.820 kb on + strand, within Echvi_2264 at 2682.821 kb on - strand, within Echvi_2264 at 2682.821 kb on - strand, within Echvi_2264 at 2682.821 kb on - strand, within Echvi_2264 at 2682.824 kb on - strand, within Echvi_2264 at 2682.824 kb on - strand, within Echvi_2264 at 2682.829 kb on - strand, within Echvi_2264 at 2682.830 kb on + strand, within Echvi_2264 at 2682.843 kb on + strand, within Echvi_2264 at 2682.931 kb on - strand, within Echvi_2264 at 2682.942 kb on + strand, within Echvi_2264 at 2682.942 kb on + strand, within Echvi_2264 at 2682.942 kb on + strand, within Echvi_2264 at 2682.943 kb on - strand, within Echvi_2264 at 2683.008 kb on + strand, within Echvi_2264 at 2683.009 kb on - strand, within Echvi_2264 at 2683.009 kb on - strand, within Echvi_2264 at 2683.231 kb on - strand, within Echvi_2264 at 2683.341 kb on - strand, within Echvi_2264 at 2683.345 kb on + strand, within Echvi_2264 at 2683.347 kb on + strand, within Echvi_2264 at 2683.347 kb on + strand, within Echvi_2264 at 2683.347 kb on + strand, within Echvi_2264 at 2683.347 kb on + strand, within Echvi_2264 at 2683.348 kb on - strand, within Echvi_2264 at 2683.348 kb on - strand, within Echvi_2264 at 2683.348 kb on - strand, within Echvi_2264 at 2683.348 kb on - strand, within Echvi_2264 at 2683.458 kb on - strand at 2683.489 kb on + strand at 2683.507 kb on + strand at 2683.507 kb on + strand at 2683.574 kb on + strand at 2683.586 kb on + strand at 2684.037 kb on - strand at 2684.054 kb on + strand at 2684.054 kb on + strand at 2684.055 kb on - strand at 2684.071 kb on - strand at 2684.189 kb on - strand, within Echvi_2266 at 2684.198 kb on + strand, within Echvi_2266 at 2684.199 kb on - strand, within Echvi_2266 at 2684.202 kb on - strand, within Echvi_2266 at 2684.262 kb on + strand, within Echvi_2266 at 2684.263 kb on - strand, within Echvi_2266 at 2684.285 kb on - strand, within Echvi_2266 at 2684.285 kb on - strand, within Echvi_2266 at 2684.289 kb on + strand, within Echvi_2266 at 2684.290 kb on - strand, within Echvi_2266 at 2684.290 kb on - strand, within Echvi_2266 at 2684.364 kb on - strand, within Echvi_2266 at 2684.364 kb on - strand, within Echvi_2266 at 2684.421 kb on + strand, within Echvi_2266 at 2684.421 kb on + strand, within Echvi_2266 at 2684.421 kb on + strand, within Echvi_2266 at 2684.422 kb on - strand, within Echvi_2266 at 2684.422 kb on - strand, within Echvi_2266 at 2684.423 kb on + strand, within Echvi_2266 at 2684.423 kb on + strand, within Echvi_2266 at 2684.424 kb on - strand, within Echvi_2266 at 2684.481 kb on - strand, within Echvi_2266 at 2684.485 kb on + strand, within Echvi_2266 at 2684.486 kb on - strand, within Echvi_2266 at 2684.521 kb on + strand, within Echvi_2266 at 2684.521 kb on + strand, within Echvi_2266 at 2684.528 kb on + strand, within Echvi_2266 at 2684.528 kb on + strand, within Echvi_2266 at 2684.528 kb on + strand, within Echvi_2266 at 2684.621 kb on + strand, within Echvi_2266 at 2684.622 kb on - strand, within Echvi_2266 at 2684.638 kb on + strand, within Echvi_2266 at 2684.638 kb on + strand, within Echvi_2266 at 2684.638 kb on + strand, within Echvi_2266 at 2684.639 kb on - strand, within Echvi_2266 at 2684.639 kb on - strand, within Echvi_2266 at 2684.639 kb on - strand, within Echvi_2266 at 2684.721 kb on + strand, within Echvi_2266 at 2684.722 kb on - strand, within Echvi_2266 at 2684.722 kb on - strand, within Echvi_2266 at 2684.723 kb on + strand, within Echvi_2266 at 2684.724 kb on - strand, within Echvi_2266 at 2684.724 kb on - strand, within Echvi_2266 at 2684.764 kb on - strand, within Echvi_2266 at 2684.764 kb on - strand, within Echvi_2266 at 2684.765 kb on + strand, within Echvi_2266 at 2684.765 kb on + strand, within Echvi_2266 at 2684.765 kb on + strand, within Echvi_2266 at 2684.766 kb on - strand, within Echvi_2266 at 2684.766 kb on - strand, within Echvi_2266 at 2684.766 kb on - strand, within Echvi_2266 at 2684.766 kb on - strand, within Echvi_2266 at 2684.771 kb on + strand, within Echvi_2266 at 2684.784 kb on + strand, within Echvi_2266 at 2684.784 kb on + strand, within Echvi_2266 at 2684.784 kb on + strand, within Echvi_2266 at 2684.785 kb on - strand, within Echvi_2266 at 2684.785 kb on - strand, within Echvi_2266 at 2684.785 kb on - strand, within Echvi_2266 at 2684.785 kb on - strand, within Echvi_2266 at 2684.786 kb on + strand, within Echvi_2266 at 2684.787 kb on - strand, within Echvi_2266 at 2684.787 kb on - strand, within Echvi_2266 at 2684.787 kb on - strand, within Echvi_2266 at 2684.787 kb on - strand, within Echvi_2266 at 2684.791 kb on + strand, within Echvi_2266 at 2684.791 kb on + strand, within Echvi_2266 at 2684.825 kb on - strand, within Echvi_2266 at 2684.860 kb on + strand, within Echvi_2266 at 2684.861 kb on - strand, within Echvi_2266 at 2684.917 kb on + strand, within Echvi_2266 at 2684.917 kb on + strand, within Echvi_2266 at 2684.917 kb on + strand, within Echvi_2266 at 2684.917 kb on + strand, within Echvi_2266 at 2684.918 kb on - strand, within Echvi_2266 at 2684.918 kb on - strand, within Echvi_2266 at 2684.918 kb on - strand, within Echvi_2266 at 2684.924 kb on - strand, within Echvi_2266 at 2684.924 kb on - strand, within Echvi_2266 at 2684.924 kb on - strand, within Echvi_2266 at 2684.924 kb on - strand, within Echvi_2266 at 2684.924 kb on - strand, within Echvi_2266 at 2684.940 kb on - strand, within Echvi_2266 at 2684.980 kb on - strand, within Echvi_2266 at 2684.988 kb on + strand, within Echvi_2266 at 2684.989 kb on - strand, within Echvi_2266 at 2684.989 kb on - strand, within Echvi_2266 at 2684.989 kb on - strand, within Echvi_2266 at 2684.989 kb on - strand, within Echvi_2266 at 2684.996 kb on + strand, within Echvi_2266 at 2684.997 kb on - strand, within Echvi_2266
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 2,682,612 - Echvi_2264 0.37 +0.8 2,682,793 + Echvi_2264 0.49 -0.1 2,682,793 + Echvi_2264 0.49 -0.5 2,682,794 - Echvi_2264 0.49 -0.0 2,682,820 + Echvi_2264 0.50 -0.6 2,682,820 + Echvi_2264 0.50 +1.1 2,682,820 + Echvi_2264 0.50 -2.3 2,682,820 + Echvi_2264 0.50 -0.2 2,682,821 - Echvi_2264 0.51 +0.7 2,682,821 - Echvi_2264 0.51 -0.8 2,682,821 - Echvi_2264 0.51 -0.8 2,682,824 - Echvi_2264 0.51 -1.7 2,682,824 - Echvi_2264 0.51 +0.5 2,682,829 - Echvi_2264 0.51 +0.7 2,682,830 + Echvi_2264 0.51 +0.3 2,682,843 + Echvi_2264 0.52 -0.5 2,682,931 - Echvi_2264 0.58 -0.6 2,682,942 + Echvi_2264 0.58 -1.6 2,682,942 + Echvi_2264 0.58 -0.5 2,682,942 + Echvi_2264 0.58 -0.0 2,682,943 - Echvi_2264 0.58 -0.6 2,683,008 + Echvi_2264 0.63 +0.5 2,683,009 - Echvi_2264 0.63 +0.0 2,683,009 - Echvi_2264 0.63 -1.8 2,683,231 - Echvi_2264 0.77 -0.1 2,683,341 - Echvi_2264 0.84 +0.8 2,683,345 + Echvi_2264 0.84 -1.6 2,683,347 + Echvi_2264 0.84 -1.2 2,683,347 + Echvi_2264 0.84 -0.8 2,683,347 + Echvi_2264 0.84 -0.3 2,683,347 + Echvi_2264 0.84 -0.7 2,683,348 - Echvi_2264 0.84 +0.6 2,683,348 - Echvi_2264 0.84 -0.4 2,683,348 - Echvi_2264 0.84 +0.7 2,683,348 - Echvi_2264 0.84 +0.6 2,683,458 - +0.2 2,683,489 + -0.5 2,683,507 + -2.4 2,683,507 + -1.3 2,683,574 + -0.4 2,683,586 + -0.2 2,684,037 - -0.9 2,684,054 + -0.2 2,684,054 + -1.5 2,684,055 - +0.8 2,684,071 - -0.5 2,684,189 - Echvi_2266 0.13 -0.2 2,684,198 + Echvi_2266 0.14 -0.7 2,684,199 - Echvi_2266 0.14 -0.2 2,684,202 - Echvi_2266 0.14 +0.6 2,684,262 + Echvi_2266 0.19 -0.2 2,684,263 - Echvi_2266 0.19 +2.5 2,684,285 - Echvi_2266 0.21 +0.7 2,684,285 - Echvi_2266 0.21 -1.0 2,684,289 + Echvi_2266 0.21 -1.0 2,684,290 - Echvi_2266 0.22 -0.8 2,684,290 - Echvi_2266 0.22 -0.8 2,684,364 - Echvi_2266 0.28 +0.7 2,684,364 - Echvi_2266 0.28 +1.0 2,684,421 + Echvi_2266 0.32 +0.5 2,684,421 + Echvi_2266 0.32 -0.7 2,684,421 + Echvi_2266 0.32 +0.2 2,684,422 - Echvi_2266 0.32 +1.6 2,684,422 - Echvi_2266 0.32 -1.3 2,684,423 + Echvi_2266 0.32 -1.7 2,684,423 + Echvi_2266 0.32 -0.1 2,684,424 - Echvi_2266 0.33 -0.8 2,684,481 - Echvi_2266 0.37 +0.4 2,684,485 + Echvi_2266 0.38 -0.5 2,684,486 - Echvi_2266 0.38 -2.4 2,684,521 + Echvi_2266 0.40 +0.8 2,684,521 + Echvi_2266 0.40 +0.4 2,684,528 + Echvi_2266 0.41 +0.0 2,684,528 + Echvi_2266 0.41 +0.5 2,684,528 + Echvi_2266 0.41 -0.4 2,684,621 + Echvi_2266 0.49 -0.5 2,684,622 - Echvi_2266 0.49 +0.2 2,684,638 + Echvi_2266 0.50 -0.9 2,684,638 + Echvi_2266 0.50 +0.3 2,684,638 + Echvi_2266 0.50 +0.1 2,684,639 - Echvi_2266 0.50 -0.0 2,684,639 - Echvi_2266 0.50 +0.2 2,684,639 - Echvi_2266 0.50 -1.3 2,684,721 + Echvi_2266 0.57 +0.2 2,684,722 - Echvi_2266 0.57 +2.8 2,684,722 - Echvi_2266 0.57 +0.1 2,684,723 + Echvi_2266 0.57 -0.5 2,684,724 - Echvi_2266 0.57 +0.4 2,684,724 - Echvi_2266 0.57 -0.4 2,684,764 - Echvi_2266 0.60 -1.4 2,684,764 - Echvi_2266 0.60 +0.7 2,684,765 + Echvi_2266 0.61 +0.2 2,684,765 + Echvi_2266 0.61 -0.6 2,684,765 + Echvi_2266 0.61 +0.5 2,684,766 - Echvi_2266 0.61 +0.1 2,684,766 - Echvi_2266 0.61 +0.5 2,684,766 - Echvi_2266 0.61 +0.3 2,684,766 - Echvi_2266 0.61 -0.4 2,684,771 + Echvi_2266 0.61 +1.4 2,684,784 + Echvi_2266 0.62 +0.0 2,684,784 + Echvi_2266 0.62 +0.4 2,684,784 + Echvi_2266 0.62 +0.1 2,684,785 - Echvi_2266 0.62 -0.5 2,684,785 - Echvi_2266 0.62 +0.1 2,684,785 - Echvi_2266 0.62 +0.1 2,684,785 - Echvi_2266 0.62 +0.9 2,684,786 + Echvi_2266 0.62 +0.7 2,684,787 - Echvi_2266 0.62 -1.9 2,684,787 - Echvi_2266 0.62 -0.5 2,684,787 - Echvi_2266 0.62 +1.9 2,684,787 - Echvi_2266 0.62 -0.5 2,684,791 + Echvi_2266 0.63 +0.2 2,684,791 + Echvi_2266 0.63 +0.0 2,684,825 - Echvi_2266 0.65 +1.5 2,684,860 + Echvi_2266 0.68 -0.1 2,684,861 - Echvi_2266 0.68 -1.1 2,684,917 + Echvi_2266 0.73 -0.2 2,684,917 + Echvi_2266 0.73 +0.4 2,684,917 + Echvi_2266 0.73 +1.6 2,684,917 + Echvi_2266 0.73 -0.1 2,684,918 - Echvi_2266 0.73 +0.3 2,684,918 - Echvi_2266 0.73 +2.2 2,684,918 - Echvi_2266 0.73 +0.2 2,684,924 - Echvi_2266 0.74 +0.6 2,684,924 - Echvi_2266 0.74 -0.1 2,684,924 - Echvi_2266 0.74 -0.0 2,684,924 - Echvi_2266 0.74 +0.9 2,684,924 - Echvi_2266 0.74 +1.2 2,684,940 - Echvi_2266 0.75 +0.4 2,684,980 - Echvi_2266 0.78 -1.7 2,684,988 + Echvi_2266 0.79 -0.6 2,684,989 - Echvi_2266 0.79 -0.2 2,684,989 - Echvi_2266 0.79 +0.2 2,684,989 - Echvi_2266 0.79 +0.3 2,684,989 - Echvi_2266 0.79 -0.3 2,684,996 + Echvi_2266 0.79 -0.2 2,684,997 - Echvi_2266 0.80 +0.2
Or see this region's nucleotide sequence