Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2103

Experiment: m.b. Nickel (II) chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2102 and Echvi_2103 are separated by 27 nucleotidesEchvi_2103 and Echvi_2104 overlap by 20 nucleotides Echvi_2102: Echvi_2102 - Heme/copper-type cytochrome/quinol oxidases, subunit 2, at 2,482,627 to 2,483,655 _2102 Echvi_2103: Echvi_2103 - Heme/copper-type cytochrome/quinol oxidases, subunit 1, at 2,483,683 to 2,485,581 _2103 Echvi_2104: Echvi_2104 - Uncharacterized protein required for cytochrome oxidase assembly, at 2,485,562 to 2,486,644 _2104 Position (kb) 2483 2484 2485 2486Strain fitness (log2 ratio) -1 0 1at 2484.194 kb on - strand, within Echvi_2103at 2485.470 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM
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2,484,194 - Echvi_2103 0.27 -0.7
2,485,470 + +0.5

Or see this region's nucleotide sequence