Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2073 and Echvi_2074 are separated by 49 nucleotides Echvi_2074 and Echvi_2075 are separated by 7 nucleotides Echvi_2075 and Echvi_2076 are separated by 206 nucleotides
Echvi_2073: Echvi_2073 - Organic solvent tolerance protein OstA, at 2,443,191 to 2,444,840
_2073
Echvi_2074: Echvi_2074 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 2,444,890 to 2,446,212
_2074
Echvi_2075: Echvi_2075 - Cyclic nucleotide-binding domain., at 2,446,220 to 2,446,735
_2075
Echvi_2076: Echvi_2076 - malate dehydrogenase, NAD-dependent, at 2,446,942 to 2,447,880
_2076
Position (kb)
2444
2445
2446
2447 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2444.847 kb on - strand at 2444.851 kb on - strand at 2444.851 kb on - strand at 2444.866 kb on - strand at 2444.878 kb on + strand at 2444.916 kb on - strand at 2444.916 kb on - strand at 2446.206 kb on - strand at 2446.244 kb on + strand at 2446.305 kb on + strand, within Echvi_2075 at 2446.341 kb on + strand, within Echvi_2075 at 2446.356 kb on - strand, within Echvi_2075 at 2446.371 kb on + strand, within Echvi_2075 at 2446.406 kb on + strand, within Echvi_2075 at 2446.406 kb on + strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.467 kb on + strand, within Echvi_2075 at 2446.472 kb on - strand, within Echvi_2075 at 2446.472 kb on - strand, within Echvi_2075 at 2446.533 kb on - strand, within Echvi_2075 at 2446.584 kb on - strand, within Echvi_2075 at 2446.592 kb on - strand, within Echvi_2075 at 2446.621 kb on - strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.653 kb on - strand, within Echvi_2075 at 2446.653 kb on - strand, within Echvi_2075 at 2446.655 kb on + strand, within Echvi_2075 at 2446.656 kb on - strand, within Echvi_2075 at 2446.656 kb on - strand, within Echvi_2075 at 2446.688 kb on + strand at 2446.693 kb on + strand at 2446.693 kb on + strand at 2446.693 kb on + strand at 2446.694 kb on - strand at 2446.733 kb on + strand at 2446.766 kb on + strand at 2446.767 kb on - strand at 2446.851 kb on - strand at 2446.851 kb on - strand at 2446.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 2,444,847 - +0.9 2,444,851 - -1.0 2,444,851 - -3.7 2,444,866 - +0.1 2,444,878 + +2.0 2,444,916 - +1.6 2,444,916 - -1.7 2,446,206 - +0.8 2,446,244 + -0.1 2,446,305 + Echvi_2075 0.16 +0.4 2,446,341 + Echvi_2075 0.23 +0.3 2,446,356 - Echvi_2075 0.26 -0.4 2,446,371 + Echvi_2075 0.29 +0.8 2,446,406 + Echvi_2075 0.36 +1.7 2,446,406 + Echvi_2075 0.36 +0.5 2,446,407 - Echvi_2075 0.36 -0.1 2,446,407 - Echvi_2075 0.36 -0.7 2,446,407 - Echvi_2075 0.36 -0.0 2,446,407 - Echvi_2075 0.36 +0.0 2,446,407 - Echvi_2075 0.36 -0.4 2,446,407 - Echvi_2075 0.36 +1.4 2,446,407 - Echvi_2075 0.36 +0.9 2,446,467 + Echvi_2075 0.48 +0.2 2,446,472 - Echvi_2075 0.49 +0.2 2,446,472 - Echvi_2075 0.49 +0.3 2,446,533 - Echvi_2075 0.61 +0.2 2,446,584 - Echvi_2075 0.71 +0.8 2,446,592 - Echvi_2075 0.72 +0.3 2,446,621 - Echvi_2075 0.78 +0.2 2,446,652 + Echvi_2075 0.84 -1.1 2,446,652 + Echvi_2075 0.84 -0.9 2,446,652 + Echvi_2075 0.84 -0.5 2,446,652 + Echvi_2075 0.84 -0.2 2,446,652 + Echvi_2075 0.84 +0.4 2,446,653 - Echvi_2075 0.84 +0.2 2,446,653 - Echvi_2075 0.84 +0.3 2,446,655 + Echvi_2075 0.84 +1.2 2,446,656 - Echvi_2075 0.84 -1.3 2,446,656 - Echvi_2075 0.84 -0.1 2,446,688 + -0.7 2,446,693 + -0.8 2,446,693 + +0.9 2,446,693 + -0.0 2,446,694 - -1.0 2,446,733 + +0.3 2,446,766 + +0.5 2,446,767 - -0.7 2,446,851 - -0.1 2,446,851 - -0.2 2,446,925 + +1.0
Or see this region's nucleotide sequence