Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2009 and Echvi_2010 are separated by 186 nucleotides Echvi_2010 and Echvi_2011 are separated by 3 nucleotides Echvi_2011 and Echvi_2012 are separated by 127 nucleotides
Echvi_2009: Echvi_2009 - adenine deaminase, at 2,361,055 to 2,362,692
_2009
Echvi_2010: Echvi_2010 - cytidylate kinase, at 2,362,879 to 2,363,565
_2010
Echvi_2011: Echvi_2011 - (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming), at 2,363,569 to 2,364,465
_2011
Echvi_2012: Echvi_2012 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit, at 2,364,593 to 2,365,957
_2012
Position (kb)
2363
2364
2365 Strain fitness (log2 ratio)
-2
-1
0
1 at 2362.660 kb on - strand at 2362.660 kb on - strand at 2362.709 kb on - strand at 2362.757 kb on + strand at 2362.757 kb on + strand at 2362.757 kb on + strand at 2362.757 kb on + strand at 2362.758 kb on - strand at 2362.761 kb on + strand at 2362.761 kb on + strand at 2362.789 kb on + strand at 2362.790 kb on - strand at 2362.790 kb on - strand at 2362.798 kb on + strand at 2362.819 kb on + strand at 2362.838 kb on + strand at 2362.849 kb on + strand at 2362.890 kb on - strand at 2363.546 kb on + strand at 2363.563 kb on + strand at 2364.427 kb on + strand at 2364.428 kb on - strand at 2364.429 kb on + strand at 2364.432 kb on + strand at 2364.433 kb on - strand at 2364.463 kb on + strand at 2364.539 kb on + strand at 2364.539 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 2,362,660 - -0.7 2,362,660 - -0.9 2,362,709 - -0.6 2,362,757 + -0.4 2,362,757 + +0.3 2,362,757 + -1.1 2,362,757 + -0.6 2,362,758 - -0.0 2,362,761 + -0.4 2,362,761 + +0.7 2,362,789 + +1.1 2,362,790 - -0.8 2,362,790 - -0.5 2,362,798 + +0.8 2,362,819 + -0.1 2,362,838 + -0.4 2,362,849 + +1.5 2,362,890 - +1.3 2,363,546 + +0.4 2,363,563 + -0.2 2,364,427 + -1.8 2,364,428 - -1.1 2,364,429 + -1.0 2,364,432 + -2.7 2,364,433 - +0.4 2,364,463 + -0.4 2,364,539 + +0.6 2,364,539 + +0.3
Or see this region's nucleotide sequence