Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1738 and Echvi_1739 are separated by 290 nucleotides Echvi_1739 and Echvi_1740 are separated by 45 nucleotides Echvi_1740 and Echvi_1741 are separated by 18 nucleotides
Echvi_1738: Echvi_1738 - hypothetical protein, at 2,047,985 to 2,049,664
_1738
Echvi_1739: Echvi_1739 - ribosomal protein L31, at 2,049,955 to 2,050,200
_1739
Echvi_1740: Echvi_1740 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 2,050,246 to 2,051,475
_1740
Echvi_1741: Echvi_1741 - DNA polymerase III, gamma/tau subunits, at 2,051,494 to 2,052,636
_1741
Position (kb)
2050
2051
2052 Strain fitness (log2 ratio)
-2
-1
0
1 at 2049.270 kb on + strand, within Echvi_1738 at 2049.270 kb on + strand, within Echvi_1738 at 2049.270 kb on + strand, within Echvi_1738 at 2049.311 kb on - strand, within Echvi_1738 at 2049.316 kb on - strand, within Echvi_1738 at 2049.318 kb on + strand, within Echvi_1738 at 2049.318 kb on + strand, within Echvi_1738 at 2049.410 kb on + strand, within Echvi_1738 at 2049.411 kb on - strand, within Echvi_1738 at 2049.495 kb on - strand, within Echvi_1738 at 2049.570 kb on + strand at 2049.571 kb on - strand at 2049.617 kb on + strand at 2049.617 kb on + strand at 2049.617 kb on + strand at 2049.617 kb on + strand at 2049.617 kb on + strand at 2049.618 kb on - strand at 2049.618 kb on - strand at 2049.618 kb on - strand at 2049.618 kb on - strand at 2049.618 kb on - strand at 2049.618 kb on - strand at 2049.638 kb on + strand at 2049.638 kb on + strand at 2049.638 kb on + strand at 2049.638 kb on + strand at 2049.664 kb on + strand at 2049.664 kb on + strand at 2049.665 kb on - strand at 2049.665 kb on - strand at 2049.665 kb on - strand at 2049.665 kb on - strand at 2049.665 kb on - strand at 2049.717 kb on + strand at 2049.718 kb on - strand at 2049.718 kb on - strand at 2049.718 kb on - strand at 2049.764 kb on + strand at 2049.834 kb on + strand at 2050.275 kb on + strand at 2051.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 2,049,270 + Echvi_1738 0.76 +0.8 2,049,270 + Echvi_1738 0.76 -0.2 2,049,270 + Echvi_1738 0.76 -0.1 2,049,311 - Echvi_1738 0.79 -1.0 2,049,316 - Echvi_1738 0.79 -0.4 2,049,318 + Echvi_1738 0.79 -1.1 2,049,318 + Echvi_1738 0.79 -0.9 2,049,410 + Echvi_1738 0.85 -0.1 2,049,411 - Echvi_1738 0.85 +0.0 2,049,495 - Echvi_1738 0.90 -0.8 2,049,570 + +1.3 2,049,571 - +1.4 2,049,617 + +1.1 2,049,617 + -0.3 2,049,617 + -0.3 2,049,617 + -0.2 2,049,617 + -1.0 2,049,618 - +1.3 2,049,618 - -0.2 2,049,618 - -0.0 2,049,618 - +0.4 2,049,618 - -0.8 2,049,618 - +0.4 2,049,638 + -0.2 2,049,638 + -0.6 2,049,638 + +1.1 2,049,638 + -0.4 2,049,664 + -0.6 2,049,664 + +1.3 2,049,665 - -0.1 2,049,665 - -0.3 2,049,665 - -0.1 2,049,665 - +0.6 2,049,665 - -0.5 2,049,717 + +0.1 2,049,718 - -0.4 2,049,718 - -0.4 2,049,718 - -2.3 2,049,764 + -0.2 2,049,834 + +0.5 2,050,275 + -0.2 2,051,473 + -0.4
Or see this region's nucleotide sequence