Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0983

Experiment: m.b. Nickel (II) chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0982 and Echvi_0983 are separated by 96 nucleotidesEchvi_0983 and Echvi_0984 are separated by 66 nucleotidesEchvi_0984 and Echvi_0985 are separated by 5 nucleotides Echvi_0982: Echvi_0982 - sulfate adenylyltransferase, large subunit, at 1,140,214 to 1,141,473 _0982 Echvi_0983: Echvi_0983 - sulfate adenylyltransferase, small subunit, at 1,141,570 to 1,142,469 _0983 Echvi_0984: Echvi_0984 - phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase, at 1,142,536 to 1,143,237 _0984 Echvi_0985: Echvi_0985 - Predicted membrane protein, at 1,143,243 to 1,143,488 _0985 Position (kb) 1141 1142 1143Strain fitness (log2 ratio) -1 0 1 2at 1141.545 kb on - strandat 1141.545 kb on - strandat 1141.552 kb on - strandat 1141.552 kb on - strandat 1142.475 kb on - strandat 1142.475 kb on - strandat 1142.478 kb on - strandat 1142.506 kb on - strandat 1142.543 kb on - strandat 1142.545 kb on - strandat 1143.245 kb on - strandat 1143.292 kb on - strand, within Echvi_0985at 1143.292 kb on - strand, within Echvi_0985at 1143.292 kb on - strand, within Echvi_0985at 1143.292 kb on - strand, within Echvi_0985at 1143.310 kb on - strand, within Echvi_0985at 1143.310 kb on - strand, within Echvi_0985at 1143.310 kb on - strand, within Echvi_0985at 1143.310 kb on - strand, within Echvi_0985at 1143.310 kb on - strand, within Echvi_0985at 1143.362 kb on - strand, within Echvi_0985at 1143.362 kb on - strand, within Echvi_0985at 1143.427 kb on - strand, within Echvi_0985at 1143.427 kb on - strand, within Echvi_0985

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM
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1,141,545 - +0.8
1,141,545 - +1.4
1,141,552 - +0.2
1,141,552 - +1.5
1,142,475 - -0.4
1,142,475 - -0.4
1,142,478 - -0.1
1,142,506 - +0.4
1,142,543 - +0.1
1,142,545 - +1.3
1,143,245 - +0.8
1,143,292 - Echvi_0985 0.20 +0.1
1,143,292 - Echvi_0985 0.20 +0.1
1,143,292 - Echvi_0985 0.20 +0.6
1,143,292 - Echvi_0985 0.20 +0.7
1,143,310 - Echvi_0985 0.27 -1.1
1,143,310 - Echvi_0985 0.27 +0.5
1,143,310 - Echvi_0985 0.27 +1.0
1,143,310 - Echvi_0985 0.27 -1.4
1,143,310 - Echvi_0985 0.27 +0.2
1,143,362 - Echvi_0985 0.48 +0.1
1,143,362 - Echvi_0985 0.48 +0.8
1,143,427 - Echvi_0985 0.75 +1.9
1,143,427 - Echvi_0985 0.75 +0.3

Or see this region's nucleotide sequence