Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0772 and Echvi_0773 are separated by 121 nucleotides Echvi_0773 and Echvi_0774 are separated by 100 nucleotides Echvi_0774 and Echvi_0775 are separated by 36 nucleotides
Echvi_0772: Echvi_0772 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component), at 868,701 to 870,275
_0772
Echvi_0773: Echvi_0773 - 2-oxoglutarate dehydrogenase, E1 component, at 870,397 to 873,195
_0773
Echvi_0774: Echvi_0774 - hypothetical protein, at 873,296 to 873,400
_0774
Echvi_0775: Echvi_0775 - NAD binding domain of 6-phosphogluconate dehydrogenase., at 873,437 to 874,339
_0775
Position (kb) 870
871
872
873
874 Strain fitness (log2 ratio) -2
-1
0
1 at 870.322 kb on - strand at 870.424 kb on - strand at 873.223 kb on - strand at 873.457 kb on + strand at 873.457 kb on + strand at 873.457 kb on + strand at 873.459 kb on + strand at 873.463 kb on - strand at 873.558 kb on + strand, within Echvi_0775 at 873.605 kb on + strand, within Echvi_0775 at 873.605 kb on + strand, within Echvi_0775 at 873.605 kb on + strand, within Echvi_0775 at 873.605 kb on + strand, within Echvi_0775 at 873.606 kb on - strand, within Echvi_0775 at 873.626 kb on + strand, within Echvi_0775 at 873.627 kb on - strand, within Echvi_0775 at 873.701 kb on + strand, within Echvi_0775 at 873.701 kb on + strand, within Echvi_0775 at 873.702 kb on - strand, within Echvi_0775 at 873.715 kb on - strand, within Echvi_0775 at 873.759 kb on + strand, within Echvi_0775 at 873.759 kb on + strand, within Echvi_0775 at 873.839 kb on + strand, within Echvi_0775 at 873.839 kb on + strand, within Echvi_0775 at 873.840 kb on - strand, within Echvi_0775 at 873.878 kb on - strand, within Echvi_0775 at 873.919 kb on + strand, within Echvi_0775 at 873.937 kb on + strand, within Echvi_0775 at 873.980 kb on - strand, within Echvi_0775 at 873.998 kb on + strand, within Echvi_0775 at 873.999 kb on - strand, within Echvi_0775 at 874.187 kb on + strand, within Echvi_0775 at 874.187 kb on + strand, within Echvi_0775
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 870,322 - -2.0 870,424 - +1.1 873,223 - -0.1 873,457 + +1.1 873,457 + -1.3 873,457 + +0.1 873,459 + -0.4 873,463 - +1.2 873,558 + Echvi_0775 0.13 -1.3 873,605 + Echvi_0775 0.19 -0.2 873,605 + Echvi_0775 0.19 -1.6 873,605 + Echvi_0775 0.19 -0.5 873,605 + Echvi_0775 0.19 -1.8 873,606 - Echvi_0775 0.19 -0.3 873,626 + Echvi_0775 0.21 +0.4 873,627 - Echvi_0775 0.21 +0.3 873,701 + Echvi_0775 0.29 -0.8 873,701 + Echvi_0775 0.29 -1.3 873,702 - Echvi_0775 0.29 -0.1 873,715 - Echvi_0775 0.31 -2.2 873,759 + Echvi_0775 0.36 -0.1 873,759 + Echvi_0775 0.36 -0.7 873,839 + Echvi_0775 0.45 -0.3 873,839 + Echvi_0775 0.45 +0.4 873,840 - Echvi_0775 0.45 -0.2 873,878 - Echvi_0775 0.49 +0.4 873,919 + Echvi_0775 0.53 +0.8 873,937 + Echvi_0775 0.55 -0.8 873,980 - Echvi_0775 0.60 -0.3 873,998 + Echvi_0775 0.62 +1.5 873,999 - Echvi_0775 0.62 +0.7 874,187 + Echvi_0775 0.83 +0.4 874,187 + Echvi_0775 0.83 -0.3
Or see this region's nucleotide sequence