Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0189

Experiment: m.b. Nickel (II) chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0188 and Echvi_0189 are separated by 24 nucleotidesEchvi_0189 and Echvi_0190 are separated by 100 nucleotidesEchvi_0190 and Echvi_0191 are separated by 29 nucleotides Echvi_0188: Echvi_0188 - 3-oxoacyl-(acyl-carrier-protein) synthase III, at 205,301 to 206,299 _0188 Echvi_0189: Echvi_0189 - translation elongation factor P, at 206,324 to 206,887 _0189 Echvi_0190: Echvi_0190 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 206,988 to 207,473 _0190 Echvi_0191: Echvi_0191 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 207,503 to 208,852 _0191 Position (kb) 206 207Strain fitness (log2 ratio) -1 0 1 2at 206.307 kb on + strandat 206.307 kb on + strandat 206.916 kb on + strandat 206.920 kb on + strandat 206.926 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM
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206,307 + -1.3
206,307 + -1.2
206,916 + -1.2
206,920 + +0.1
206,926 + +1.8

Or see this region's nucleotide sequence