Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0035 and Echvi_0036 are separated by 80 nucleotides Echvi_0036 and Echvi_0037 are separated by 31 nucleotides Echvi_0037 and Echvi_0038 overlap by 4 nucleotides
Echvi_0035: Echvi_0035 - Domain of Unknown Function (DUF349)., at 33,615 to 34,907
_0035
Echvi_0036: Echvi_0036 - Protein of unknown function (DUF2795)., at 34,988 to 35,209
_0036
Echvi_0037: Echvi_0037 - Response regulator of the LytR/AlgR family, at 35,241 to 35,978
_0037
Echvi_0038: Echvi_0038 - Putative regulator of cell autolysis, at 35,975 to 37,018
_0038
Position (kb) 34
35
36 Strain fitness (log2 ratio) -1
0
1
2 at 34.115 kb on + strand, within Echvi_0035 at 34.115 kb on + strand, within Echvi_0035 at 34.116 kb on - strand, within Echvi_0035 at 34.116 kb on - strand, within Echvi_0035 at 34.147 kb on - strand, within Echvi_0035 at 34.183 kb on + strand, within Echvi_0035 at 34.184 kb on - strand, within Echvi_0035 at 34.184 kb on - strand, within Echvi_0035 at 34.346 kb on - strand, within Echvi_0035 at 34.427 kb on + strand, within Echvi_0035 at 34.427 kb on + strand, within Echvi_0035 at 34.427 kb on + strand, within Echvi_0035 at 34.445 kb on - strand, within Echvi_0035 at 34.570 kb on + strand, within Echvi_0035 at 34.571 kb on - strand, within Echvi_0035 at 34.603 kb on - strand, within Echvi_0035 at 34.626 kb on - strand, within Echvi_0035 at 34.631 kb on + strand, within Echvi_0035 at 34.631 kb on + strand, within Echvi_0035 at 34.632 kb on - strand, within Echvi_0035 at 34.632 kb on - strand, within Echvi_0035 at 34.677 kb on + strand, within Echvi_0035 at 34.678 kb on - strand, within Echvi_0035 at 34.678 kb on - strand, within Echvi_0035 at 34.678 kb on - strand, within Echvi_0035 at 34.683 kb on - strand, within Echvi_0035 at 34.683 kb on - strand, within Echvi_0035 at 34.686 kb on + strand, within Echvi_0035 at 34.686 kb on + strand, within Echvi_0035 at 34.687 kb on - strand, within Echvi_0035 at 34.689 kb on + strand, within Echvi_0035 at 34.694 kb on + strand, within Echvi_0035 at 34.695 kb on - strand, within Echvi_0035 at 34.731 kb on - strand, within Echvi_0035 at 34.852 kb on - strand at 34.881 kb on - strand at 34.884 kb on - strand at 34.938 kb on + strand at 35.242 kb on + strand at 35.242 kb on + strand at 35.242 kb on + strand at 35.273 kb on + strand at 35.309 kb on + strand at 35.354 kb on + strand, within Echvi_0037 at 35.354 kb on + strand, within Echvi_0037 at 35.355 kb on - strand, within Echvi_0037 at 35.376 kb on - strand, within Echvi_0037 at 35.377 kb on + strand, within Echvi_0037 at 35.377 kb on + strand, within Echvi_0037 at 35.377 kb on + strand, within Echvi_0037 at 35.377 kb on + strand, within Echvi_0037 at 35.378 kb on - strand, within Echvi_0037 at 35.378 kb on - strand, within Echvi_0037 at 35.378 kb on - strand, within Echvi_0037 at 35.378 kb on - strand, within Echvi_0037 at 35.378 kb on - strand, within Echvi_0037 at 35.388 kb on + strand, within Echvi_0037 at 35.451 kb on - strand, within Echvi_0037 at 35.452 kb on + strand, within Echvi_0037 at 35.570 kb on - strand, within Echvi_0037 at 35.570 kb on - strand, within Echvi_0037 at 35.604 kb on + strand, within Echvi_0037 at 35.604 kb on + strand, within Echvi_0037 at 35.604 kb on + strand, within Echvi_0037 at 35.728 kb on + strand, within Echvi_0037 at 35.920 kb on + strand at 35.960 kb on + strand at 35.960 kb on + strand at 35.961 kb on - strand at 35.961 kb on - strand at 35.996 kb on + strand at 35.997 kb on - strand at 36.003 kb on - strand at 36.014 kb on - strand at 36.014 kb on - strand at 36.070 kb on - strand at 36.070 kb on - strand at 36.070 kb on - strand at 36.070 kb on - strand at 36.136 kb on - strand, within Echvi_0038 at 36.162 kb on + strand, within Echvi_0038 at 36.209 kb on - strand, within Echvi_0038
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 34,115 + Echvi_0035 0.39 -1.7 34,115 + Echvi_0035 0.39 -0.4 34,116 - Echvi_0035 0.39 +2.6 34,116 - Echvi_0035 0.39 -0.4 34,147 - Echvi_0035 0.41 -0.2 34,183 + Echvi_0035 0.44 -0.8 34,184 - Echvi_0035 0.44 +0.2 34,184 - Echvi_0035 0.44 +1.0 34,346 - Echvi_0035 0.57 +0.3 34,427 + Echvi_0035 0.63 +1.0 34,427 + Echvi_0035 0.63 +0.3 34,427 + Echvi_0035 0.63 +1.2 34,445 - Echvi_0035 0.64 -0.4 34,570 + Echvi_0035 0.74 -0.9 34,571 - Echvi_0035 0.74 -0.3 34,603 - Echvi_0035 0.76 +0.8 34,626 - Echvi_0035 0.78 +0.2 34,631 + Echvi_0035 0.79 +0.0 34,631 + Echvi_0035 0.79 -0.6 34,632 - Echvi_0035 0.79 +0.2 34,632 - Echvi_0035 0.79 +0.0 34,677 + Echvi_0035 0.82 +0.4 34,678 - Echvi_0035 0.82 +0.5 34,678 - Echvi_0035 0.82 +0.2 34,678 - Echvi_0035 0.82 +0.4 34,683 - Echvi_0035 0.83 +0.9 34,683 - Echvi_0035 0.83 -1.6 34,686 + Echvi_0035 0.83 -0.1 34,686 + Echvi_0035 0.83 +0.3 34,687 - Echvi_0035 0.83 +0.3 34,689 + Echvi_0035 0.83 -1.0 34,694 + Echvi_0035 0.83 -0.0 34,695 - Echvi_0035 0.84 +0.9 34,731 - Echvi_0035 0.86 +0.1 34,852 - +0.0 34,881 - -0.4 34,884 - +0.0 34,938 + -0.3 35,242 + +0.2 35,242 + +0.5 35,242 + -0.5 35,273 + -1.7 35,309 + -0.2 35,354 + Echvi_0037 0.15 +0.5 35,354 + Echvi_0037 0.15 -0.8 35,355 - Echvi_0037 0.15 -0.2 35,376 - Echvi_0037 0.18 +1.3 35,377 + Echvi_0037 0.18 -1.0 35,377 + Echvi_0037 0.18 +0.5 35,377 + Echvi_0037 0.18 +0.3 35,377 + Echvi_0037 0.18 +0.9 35,378 - Echvi_0037 0.19 +0.1 35,378 - Echvi_0037 0.19 +0.2 35,378 - Echvi_0037 0.19 -1.3 35,378 - Echvi_0037 0.19 +1.8 35,378 - Echvi_0037 0.19 +0.0 35,388 + Echvi_0037 0.20 +0.8 35,451 - Echvi_0037 0.28 +0.5 35,452 + Echvi_0037 0.29 -0.4 35,570 - Echvi_0037 0.45 +0.3 35,570 - Echvi_0037 0.45 +0.5 35,604 + Echvi_0037 0.49 +1.0 35,604 + Echvi_0037 0.49 -0.7 35,604 + Echvi_0037 0.49 +0.1 35,728 + Echvi_0037 0.66 +0.6 35,920 + +1.0 35,960 + +0.4 35,960 + +0.9 35,961 - +0.3 35,961 - -0.5 35,996 + +1.7 35,997 - +0.2 36,003 - +0.6 36,014 - -1.3 36,014 - +1.4 36,070 - -0.8 36,070 - -0.6 36,070 - -0.8 36,070 - +0.0 36,136 - Echvi_0038 0.15 -0.8 36,162 + Echvi_0038 0.18 -1.6 36,209 - Echvi_0038 0.22 -1.0
Or see this region's nucleotide sequence