Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21060 and CA264_21065 are separated by 138 nucleotides CA264_21065 and CA264_21070 are separated by 39 nucleotides CA264_21070 and CA264_21075 are separated by 124 nucleotides
CA264_21060: CA264_21060 - hypothetical protein, at 75,952 to 77,211
_21060
CA264_21065: CA264_21065 - transcriptional regulator, at 77,350 to 77,685
_21065
CA264_21070: CA264_21070 - transcriptional repressor, at 77,725 to 78,138
_21070
CA264_21075: CA264_21075 - ATP-binding protein, at 78,263 to 79,024
_21075
Position (kb)
77
78
79 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 76.750 kb on + strand, within CA264_21060 at 76.751 kb on - strand, within CA264_21060 at 76.752 kb on + strand, within CA264_21060 at 76.753 kb on - strand, within CA264_21060 at 76.753 kb on - strand, within CA264_21060 at 76.763 kb on + strand, within CA264_21060 at 76.763 kb on + strand, within CA264_21060 at 76.763 kb on + strand, within CA264_21060 at 76.764 kb on - strand, within CA264_21060 at 76.765 kb on + strand, within CA264_21060 at 76.765 kb on + strand, within CA264_21060 at 76.766 kb on - strand, within CA264_21060 at 76.766 kb on - strand, within CA264_21060 at 76.766 kb on - strand, within CA264_21060 at 76.766 kb on - strand, within CA264_21060 at 76.767 kb on + strand, within CA264_21060 at 76.767 kb on + strand, within CA264_21060 at 76.767 kb on + strand, within CA264_21060 at 76.767 kb on + strand, within CA264_21060 at 76.768 kb on - strand, within CA264_21060 at 76.768 kb on - strand, within CA264_21060 at 76.831 kb on - strand, within CA264_21060 at 76.831 kb on - strand, within CA264_21060 at 76.831 kb on - strand, within CA264_21060 at 76.854 kb on + strand, within CA264_21060 at 76.854 kb on + strand, within CA264_21060 at 76.855 kb on - strand, within CA264_21060 at 76.858 kb on + strand, within CA264_21060 at 76.858 kb on + strand, within CA264_21060 at 76.859 kb on - strand, within CA264_21060 at 76.874 kb on + strand, within CA264_21060 at 76.874 kb on + strand, within CA264_21060 at 76.875 kb on - strand, within CA264_21060 at 76.884 kb on + strand, within CA264_21060 at 77.076 kb on - strand, within CA264_21060 at 77.076 kb on - strand, within CA264_21060 at 77.088 kb on + strand at 77.108 kb on + strand at 77.108 kb on + strand at 77.109 kb on - strand at 77.109 kb on - strand at 77.133 kb on + strand at 77.149 kb on + strand at 77.161 kb on + strand at 77.162 kb on - strand at 77.162 kb on - strand at 77.169 kb on + strand at 77.216 kb on + strand at 77.216 kb on + strand at 77.302 kb on - strand at 77.326 kb on - strand at 77.327 kb on + strand at 77.370 kb on + strand at 77.397 kb on - strand, within CA264_21065 at 77.573 kb on + strand, within CA264_21065 at 77.573 kb on + strand, within CA264_21065 at 77.621 kb on - strand, within CA264_21065 at 77.621 kb on - strand, within CA264_21065 at 77.709 kb on + strand at 77.717 kb on + strand at 77.718 kb on - strand at 77.826 kb on + strand, within CA264_21070 at 77.876 kb on + strand, within CA264_21070 at 77.877 kb on - strand, within CA264_21070 at 77.877 kb on - strand, within CA264_21070 at 77.877 kb on - strand, within CA264_21070 at 77.916 kb on - strand, within CA264_21070 at 77.916 kb on - strand, within CA264_21070 at 77.916 kb on - strand, within CA264_21070 at 77.950 kb on + strand, within CA264_21070 at 77.951 kb on - strand, within CA264_21070 at 77.951 kb on - strand, within CA264_21070 at 77.951 kb on - strand, within CA264_21070 at 78.060 kb on + strand, within CA264_21070 at 78.061 kb on - strand, within CA264_21070 at 78.061 kb on - strand, within CA264_21070 at 78.062 kb on + strand, within CA264_21070 at 78.063 kb on - strand, within CA264_21070 at 78.063 kb on - strand, within CA264_21070 at 78.095 kb on + strand, within CA264_21070 at 78.095 kb on + strand, within CA264_21070 at 78.136 kb on + strand at 78.137 kb on - strand at 78.137 kb on - strand at 78.145 kb on - strand at 78.181 kb on - strand at 78.191 kb on + strand at 78.191 kb on + strand at 78.191 kb on + strand at 78.191 kb on + strand at 78.192 kb on - strand at 78.192 kb on - strand at 78.192 kb on - strand at 78.192 kb on - strand at 78.192 kb on - strand at 78.192 kb on - strand at 78.194 kb on - strand at 78.203 kb on + strand at 78.203 kb on + strand at 78.204 kb on - strand at 78.204 kb on - strand at 78.204 kb on - strand at 78.206 kb on - strand at 78.207 kb on + strand at 78.221 kb on - strand at 78.247 kb on + strand at 78.248 kb on - strand at 78.251 kb on + strand at 78.252 kb on - strand at 78.325 kb on - strand at 78.346 kb on - strand, within CA264_21075 at 78.375 kb on + strand, within CA264_21075 at 78.406 kb on + strand, within CA264_21075 at 78.406 kb on + strand, within CA264_21075 at 78.407 kb on - strand, within CA264_21075 at 78.441 kb on - strand, within CA264_21075 at 78.441 kb on - strand, within CA264_21075 at 78.456 kb on + strand, within CA264_21075 at 78.457 kb on - strand, within CA264_21075 at 78.469 kb on - strand, within CA264_21075 at 78.533 kb on + strand, within CA264_21075 at 78.534 kb on - strand, within CA264_21075 at 78.534 kb on - strand, within CA264_21075 at 78.534 kb on - strand, within CA264_21075 at 78.534 kb on - strand, within CA264_21075 at 78.633 kb on - strand, within CA264_21075 at 78.792 kb on - strand, within CA264_21075 at 78.820 kb on - strand, within CA264_21075 at 78.820 kb on - strand, within CA264_21075 at 78.827 kb on - strand, within CA264_21075 at 78.840 kb on + strand, within CA264_21075 at 78.840 kb on + strand, within CA264_21075 at 78.841 kb on - strand, within CA264_21075 at 78.841 kb on - strand, within CA264_21075 at 78.841 kb on - strand, within CA264_21075 at 78.865 kb on + strand, within CA264_21075 at 78.877 kb on + strand, within CA264_21075 at 78.951 kb on + strand at 78.967 kb on + strand at 79.003 kb on + strand at 79.004 kb on - strand at 79.004 kb on - strand at 79.020 kb on - strand at 79.054 kb on + strand at 79.054 kb on + strand at 79.076 kb on + strand at 79.076 kb on + strand at 79.077 kb on - strand at 79.077 kb on - strand at 79.077 kb on - strand at 79.077 kb on - strand at 79.078 kb on + strand at 79.078 kb on + strand at 79.079 kb on - strand at 79.079 kb on - strand at 79.079 kb on - strand at 79.081 kb on - strand at 79.081 kb on - strand at 79.081 kb on - strand at 79.081 kb on - strand at 79.083 kb on + strand at 79.083 kb on + strand at 79.083 kb on + strand at 79.084 kb on - strand at 79.084 kb on - strand at 79.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 76,750 + CA264_21060 0.63 -0.4 76,751 - CA264_21060 0.63 -1.0 76,752 + CA264_21060 0.63 -1.5 76,753 - CA264_21060 0.64 -3.2 76,753 - CA264_21060 0.64 -2.2 76,763 + CA264_21060 0.64 -1.6 76,763 + CA264_21060 0.64 -0.9 76,763 + CA264_21060 0.64 -1.0 76,764 - CA264_21060 0.64 -1.1 76,765 + CA264_21060 0.65 -0.2 76,765 + CA264_21060 0.65 -1.3 76,766 - CA264_21060 0.65 -1.6 76,766 - CA264_21060 0.65 +0.2 76,766 - CA264_21060 0.65 -1.0 76,766 - CA264_21060 0.65 -1.5 76,767 + CA264_21060 0.65 -1.7 76,767 + CA264_21060 0.65 -1.8 76,767 + CA264_21060 0.65 -1.9 76,767 + CA264_21060 0.65 -1.3 76,768 - CA264_21060 0.65 -1.1 76,768 - CA264_21060 0.65 -2.5 76,831 - CA264_21060 0.70 -1.4 76,831 - CA264_21060 0.70 -0.1 76,831 - CA264_21060 0.70 -1.9 76,854 + CA264_21060 0.72 -1.5 76,854 + CA264_21060 0.72 -0.3 76,855 - CA264_21060 0.72 -1.6 76,858 + CA264_21060 0.72 -0.5 76,858 + CA264_21060 0.72 -0.7 76,859 - CA264_21060 0.72 -1.4 76,874 + CA264_21060 0.73 -2.0 76,874 + CA264_21060 0.73 -1.3 76,875 - CA264_21060 0.73 -0.7 76,884 + CA264_21060 0.74 -1.5 77,076 - CA264_21060 0.89 -0.2 77,076 - CA264_21060 0.89 -2.5 77,088 + -1.0 77,108 + -1.5 77,108 + -0.5 77,109 - -2.8 77,109 - -1.9 77,133 + -0.4 77,149 + -1.0 77,161 + +0.0 77,162 - -0.2 77,162 - -0.9 77,169 + -0.7 77,216 + -1.6 77,216 + -0.9 77,302 - -2.2 77,326 - -0.5 77,327 + -0.9 77,370 + -1.1 77,397 - CA264_21065 0.14 -0.4 77,573 + CA264_21065 0.66 +1.7 77,573 + CA264_21065 0.66 -1.7 77,621 - CA264_21065 0.81 -2.8 77,621 - CA264_21065 0.81 -0.5 77,709 + -0.7 77,717 + -1.6 77,718 - -1.2 77,826 + CA264_21070 0.24 -2.0 77,876 + CA264_21070 0.36 -0.9 77,877 - CA264_21070 0.37 -0.6 77,877 - CA264_21070 0.37 -0.2 77,877 - CA264_21070 0.37 +0.5 77,916 - CA264_21070 0.46 -1.6 77,916 - CA264_21070 0.46 -1.0 77,916 - CA264_21070 0.46 -0.9 77,950 + CA264_21070 0.54 -1.6 77,951 - CA264_21070 0.55 -1.9 77,951 - CA264_21070 0.55 -2.1 77,951 - CA264_21070 0.55 -2.3 78,060 + CA264_21070 0.81 -2.2 78,061 - CA264_21070 0.81 -1.7 78,061 - CA264_21070 0.81 -0.5 78,062 + CA264_21070 0.81 -0.5 78,063 - CA264_21070 0.82 +0.4 78,063 - CA264_21070 0.82 -2.1 78,095 + CA264_21070 0.89 -3.2 78,095 + CA264_21070 0.89 -2.2 78,136 + -1.9 78,137 - -0.7 78,137 - +1.0 78,145 - -2.6 78,181 - +0.9 78,191 + -0.2 78,191 + -1.8 78,191 + -1.6 78,191 + -2.1 78,192 - -1.6 78,192 - -1.4 78,192 - -2.5 78,192 - -1.0 78,192 - -2.2 78,192 - -1.3 78,194 - -2.6 78,203 + -0.7 78,203 + -2.6 78,204 - -1.1 78,204 - -1.1 78,204 - -3.7 78,206 - -1.5 78,207 + -2.7 78,221 - -1.7 78,247 + -2.8 78,248 - +0.1 78,251 + -1.1 78,252 - -0.7 78,325 - -2.2 78,346 - CA264_21075 0.11 -1.6 78,375 + CA264_21075 0.15 -0.1 78,406 + CA264_21075 0.19 -1.2 78,406 + CA264_21075 0.19 -2.1 78,407 - CA264_21075 0.19 +0.1 78,441 - CA264_21075 0.23 +0.0 78,441 - CA264_21075 0.23 -0.5 78,456 + CA264_21075 0.25 -2.1 78,457 - CA264_21075 0.25 -2.2 78,469 - CA264_21075 0.27 +0.3 78,533 + CA264_21075 0.35 +1.1 78,534 - CA264_21075 0.36 -0.8 78,534 - CA264_21075 0.36 -1.9 78,534 - CA264_21075 0.36 -1.2 78,534 - CA264_21075 0.36 -1.2 78,633 - CA264_21075 0.49 -3.1 78,792 - CA264_21075 0.69 -2.2 78,820 - CA264_21075 0.73 -1.5 78,820 - CA264_21075 0.73 -0.2 78,827 - CA264_21075 0.74 -1.8 78,840 + CA264_21075 0.76 -0.9 78,840 + CA264_21075 0.76 -0.0 78,841 - CA264_21075 0.76 +0.0 78,841 - CA264_21075 0.76 -2.4 78,841 - CA264_21075 0.76 -1.6 78,865 + CA264_21075 0.79 -2.5 78,877 + CA264_21075 0.81 -0.9 78,951 + -1.3 78,967 + -0.8 79,003 + -2.6 79,004 - -1.5 79,004 - -1.6 79,020 - -0.5 79,054 + -0.0 79,054 + -0.9 79,076 + -1.7 79,076 + -2.3 79,077 - -1.4 79,077 - -0.0 79,077 - -1.3 79,077 - -1.6 79,078 + -0.8 79,078 + -1.5 79,079 - -1.6 79,079 - -1.5 79,079 - -1.6 79,081 - -1.1 79,081 - -1.2 79,081 - -2.6 79,081 - -0.2 79,083 + -2.6 79,083 + -0.1 79,083 + -2.5 79,084 - -1.0 79,084 - +0.3 79,118 - -2.9
Or see this region's nucleotide sequence