Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21040 and CA264_21045 are separated by 850 nucleotides CA264_21045 and CA264_21050 are separated by 100 nucleotides CA264_21050 and CA264_21055 are separated by 6 nucleotides
CA264_21040: CA264_21040 - transcriptional regulator, at 69,669 to 70,019
_21040
CA264_21045: CA264_21045 - hypothetical protein, at 70,870 to 71,220
_21045
CA264_21050: CA264_21050 - hypothetical protein, at 71,321 to 71,515
_21050
CA264_21055: CA264_21055 - CusA/CzcA family heavy metal efflux RND transporter, at 71,522 to 75,931
_21055
Position (kb)
70
71
72 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 69.997 kb on + strand at 70.017 kb on + strand at 70.018 kb on - strand at 70.051 kb on - strand at 70.060 kb on + strand at 70.063 kb on + strand at 70.063 kb on + strand at 70.065 kb on + strand at 70.160 kb on - strand at 70.199 kb on - strand at 70.343 kb on + strand at 70.343 kb on + strand at 70.344 kb on - strand at 70.361 kb on - strand at 70.370 kb on + strand at 70.370 kb on + strand at 70.391 kb on + strand at 70.399 kb on + strand at 70.400 kb on - strand at 70.402 kb on - strand at 70.420 kb on - strand at 70.458 kb on - strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.515 kb on + strand at 70.533 kb on - strand at 70.571 kb on - strand at 70.574 kb on - strand at 70.579 kb on + strand at 70.581 kb on + strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.585 kb on + strand at 70.585 kb on + strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.588 kb on - strand at 70.588 kb on - strand at 70.631 kb on - strand at 70.631 kb on - strand at 70.634 kb on + strand at 70.635 kb on - strand at 70.635 kb on - strand at 70.638 kb on - strand at 70.638 kb on - strand at 70.641 kb on + strand at 70.641 kb on + strand at 70.642 kb on - strand at 70.671 kb on + strand at 70.671 kb on + strand at 70.672 kb on - strand at 70.691 kb on - strand at 70.701 kb on + strand at 70.701 kb on + strand at 70.702 kb on - strand at 70.705 kb on + strand at 70.706 kb on - strand at 70.706 kb on - strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.713 kb on - strand at 70.720 kb on + strand at 70.721 kb on - strand at 70.727 kb on - strand at 70.727 kb on - strand at 70.743 kb on + strand at 70.744 kb on - strand at 70.744 kb on - strand at 70.744 kb on - strand at 70.759 kb on - strand at 70.803 kb on + strand at 70.804 kb on - strand at 70.824 kb on + strand at 70.837 kb on - strand at 70.871 kb on + strand at 70.876 kb on + strand at 70.877 kb on - strand at 70.880 kb on + strand at 70.881 kb on - strand at 70.974 kb on + strand, within CA264_21045 at 71.065 kb on - strand, within CA264_21045 at 71.073 kb on - strand, within CA264_21045 at 71.120 kb on - strand, within CA264_21045 at 71.120 kb on - strand, within CA264_21045 at 71.127 kb on + strand, within CA264_21045 at 71.216 kb on + strand at 71.256 kb on - strand at 71.260 kb on - strand at 71.351 kb on - strand, within CA264_21050 at 71.385 kb on - strand, within CA264_21050 at 71.443 kb on - strand, within CA264_21050 at 71.487 kb on - strand, within CA264_21050 at 71.533 kb on + strand at 71.534 kb on - strand at 71.534 kb on - strand at 71.624 kb on - strand at 71.644 kb on + strand at 71.720 kb on + strand at 71.720 kb on + strand at 71.831 kb on + strand at 71.831 kb on + strand at 71.832 kb on - strand at 71.832 kb on - strand at 71.871 kb on + strand at 71.934 kb on + strand at 71.936 kb on + strand at 71.936 kb on + strand at 71.936 kb on + strand at 71.937 kb on - strand at 71.937 kb on - strand at 71.937 kb on - strand at 71.937 kb on - strand at 71.943 kb on - strand at 71.978 kb on + strand, within CA264_21055 at 71.979 kb on - strand, within CA264_21055 at 71.994 kb on + strand, within CA264_21055 at 71.995 kb on - strand, within CA264_21055 at 71.995 kb on - strand, within CA264_21055 at 71.995 kb on - strand, within CA264_21055 at 71.998 kb on + strand, within CA264_21055 at 71.999 kb on - strand, within CA264_21055 at 72.003 kb on + strand, within CA264_21055 at 72.003 kb on + strand, within CA264_21055 at 72.004 kb on - strand, within CA264_21055 at 72.004 kb on - strand, within CA264_21055 at 72.058 kb on - strand, within CA264_21055 at 72.115 kb on + strand, within CA264_21055 at 72.116 kb on - strand, within CA264_21055 at 72.144 kb on + strand, within CA264_21055 at 72.188 kb on + strand, within CA264_21055
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 69,997 + -1.4 70,017 + -2.0 70,018 - +0.1 70,051 - -2.1 70,060 + -0.6 70,063 + -1.2 70,063 + -0.5 70,065 + -0.8 70,160 - -1.9 70,199 - -0.2 70,343 + -1.3 70,343 + -1.9 70,344 - +0.6 70,361 - -0.2 70,370 + -2.2 70,370 + -0.9 70,391 + -1.8 70,399 + -2.0 70,400 - -0.4 70,402 - -0.2 70,420 - -0.5 70,458 - -0.3 70,500 + -1.7 70,500 + -1.1 70,500 + -1.8 70,515 + -1.6 70,533 - +0.5 70,571 - +0.3 70,574 - -0.5 70,579 + -1.5 70,581 + -2.4 70,582 - -0.3 70,582 - +0.1 70,582 - -0.2 70,585 + -1.2 70,585 + -1.9 70,586 - -0.8 70,586 - -1.9 70,586 - +0.1 70,587 + -3.9 70,587 + -2.4 70,587 + -1.0 70,588 - -0.0 70,588 - -0.0 70,631 - -1.4 70,631 - -0.3 70,634 + -2.0 70,635 - -0.4 70,635 - -0.1 70,638 - -0.4 70,638 - +0.2 70,641 + -2.0 70,641 + -1.5 70,642 - -0.0 70,671 + -1.6 70,671 + -3.6 70,672 - -0.4 70,691 - +0.5 70,701 + -1.7 70,701 + -1.9 70,702 - +0.5 70,705 + -1.7 70,706 - -0.8 70,706 - -0.5 70,712 + -2.5 70,712 + -1.2 70,712 + -2.6 70,712 + -2.9 70,713 - -0.3 70,720 + -1.5 70,721 - -0.3 70,727 - +0.4 70,727 - -0.1 70,743 + -5.1 70,744 - -1.0 70,744 - -0.8 70,744 - -0.4 70,759 - -0.5 70,803 + -2.6 70,804 - -0.5 70,824 + -2.4 70,837 - +0.8 70,871 + -0.9 70,876 + -2.8 70,877 - -0.3 70,880 + -2.4 70,881 - -0.8 70,974 + CA264_21045 0.30 -2.1 71,065 - CA264_21045 0.56 -0.1 71,073 - CA264_21045 0.58 +2.1 71,120 - CA264_21045 0.71 -0.6 71,120 - CA264_21045 0.71 -0.2 71,127 + CA264_21045 0.73 -1.0 71,216 + -1.9 71,256 - -1.5 71,260 - -3.4 71,351 - CA264_21050 0.15 -2.1 71,385 - CA264_21050 0.33 -0.6 71,443 - CA264_21050 0.63 -1.5 71,487 - CA264_21050 0.85 +0.3 71,533 + -3.0 71,534 - -2.0 71,534 - -2.0 71,624 - -0.3 71,644 + -0.5 71,720 + -1.2 71,720 + -0.2 71,831 + -2.3 71,831 + -1.8 71,832 - -1.2 71,832 - -0.6 71,871 + -1.1 71,934 + -1.9 71,936 + -0.6 71,936 + -1.1 71,936 + -1.1 71,937 - -0.9 71,937 - -0.3 71,937 - -0.7 71,937 - -0.6 71,943 - -0.9 71,978 + CA264_21055 0.10 -0.1 71,979 - CA264_21055 0.10 -1.3 71,994 + CA264_21055 0.11 -1.4 71,995 - CA264_21055 0.11 -0.8 71,995 - CA264_21055 0.11 -1.5 71,995 - CA264_21055 0.11 -1.1 71,998 + CA264_21055 0.11 +1.2 71,999 - CA264_21055 0.11 -0.2 72,003 + CA264_21055 0.11 -0.1 72,003 + CA264_21055 0.11 -1.1 72,004 - CA264_21055 0.11 -0.9 72,004 - CA264_21055 0.11 +0.2 72,058 - CA264_21055 0.12 -0.5 72,115 + CA264_21055 0.13 -0.5 72,116 - CA264_21055 0.13 -1.5 72,144 + CA264_21055 0.14 -1.0 72,188 + CA264_21055 0.15 -0.4
Or see this region's nucleotide sequence