Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20045 and CA264_20050 overlap by 17 nucleotides CA264_20050 and CA264_20055 are separated by 11 nucleotides CA264_20055 and CA264_20060 are separated by 69 nucleotides CA264_20060 and CA264_20065 are separated by 50 nucleotides
CA264_20045: CA264_20045 - UDP-2,3-diacylglucosamine hydrolase, at 4,620,491 to 4,621,261
_20045
CA264_20050: CA264_20050 - hypothetical protein, at 4,621,245 to 4,621,898
_20050
CA264_20055: CA264_20055 - peptidase M41, at 4,621,910 to 4,624,033
_20055
CA264_20060: CA264_20060 - ribosome silencing factor RsfS, at 4,624,103 to 4,624,477
_20060
CA264_20065: CA264_20065 - biotin--[acetyl-CoA-carboxylase] ligase, at 4,624,528 to 4,625,277
_20065
Position (kb)
4621
4622
4623
4624
4625 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 4621.305 kb on + strand at 4621.381 kb on + strand, within CA264_20050 at 4621.381 kb on + strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050 at 4621.600 kb on - strand, within CA264_20050 at 4621.681 kb on + strand, within CA264_20050 at 4621.682 kb on - strand, within CA264_20050 at 4621.717 kb on + strand, within CA264_20050 at 4621.717 kb on + strand, within CA264_20050 at 4621.718 kb on - strand, within CA264_20050 at 4621.722 kb on - strand, within CA264_20050 at 4621.786 kb on - strand, within CA264_20050 at 4621.867 kb on - strand at 4621.869 kb on + strand at 4621.869 kb on + strand at 4621.873 kb on - strand at 4621.895 kb on - strand at 4621.928 kb on + strand at 4621.928 kb on + strand at 4621.929 kb on - strand at 4623.800 kb on + strand, within CA264_20055 at 4623.902 kb on + strand at 4624.042 kb on - strand at 4624.042 kb on - strand at 4624.124 kb on + strand at 4624.124 kb on + strand at 4624.193 kb on + strand, within CA264_20060 at 4624.194 kb on - strand, within CA264_20060 at 4624.197 kb on - strand, within CA264_20060 at 4624.340 kb on + strand, within CA264_20060 at 4624.499 kb on + strand at 4624.500 kb on - strand at 4624.521 kb on + strand at 4624.524 kb on + strand at 4624.525 kb on - strand at 4624.525 kb on - strand at 4624.527 kb on + strand at 4624.527 kb on + strand at 4624.527 kb on + strand at 4624.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,621,305 + -0.7 4,621,381 + CA264_20050 0.21 -0.2 4,621,381 + CA264_20050 0.21 +0.4 4,621,382 - CA264_20050 0.21 +0.6 4,621,382 - CA264_20050 0.21 -0.4 4,621,600 - CA264_20050 0.54 +0.0 4,621,681 + CA264_20050 0.67 -2.0 4,621,682 - CA264_20050 0.67 -0.1 4,621,717 + CA264_20050 0.72 -1.1 4,621,717 + CA264_20050 0.72 +0.0 4,621,718 - CA264_20050 0.72 -0.1 4,621,722 - CA264_20050 0.73 -0.1 4,621,786 - CA264_20050 0.83 +0.5 4,621,867 - -0.1 4,621,869 + +0.2 4,621,869 + -0.6 4,621,873 - -0.5 4,621,895 - -0.3 4,621,928 + -0.5 4,621,928 + +0.7 4,621,929 - -0.0 4,623,800 + CA264_20055 0.89 -5.1 4,623,902 + -0.0 4,624,042 - -0.1 4,624,042 - +1.1 4,624,124 + +0.3 4,624,124 + +0.1 4,624,193 + CA264_20060 0.24 +1.8 4,624,194 - CA264_20060 0.24 +0.2 4,624,197 - CA264_20060 0.25 +0.2 4,624,340 + CA264_20060 0.63 +1.2 4,624,499 + -0.2 4,624,500 - -2.8 4,624,521 + +1.4 4,624,524 + +0.4 4,624,525 - -0.3 4,624,525 - +0.1 4,624,527 + +0.1 4,624,527 + +2.4 4,624,527 + -0.1 4,624,528 - -1.4
Or see this region's nucleotide sequence