Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19690 and CA264_19695 are separated by 177 nucleotides CA264_19695 and CA264_19700 are separated by 253 nucleotides
CA264_19690: CA264_19690 - ATP-dependent exodnase (exonuclease V) alpha subunit - helicase superfamily I member, at 4,545,539 to 4,546,348
_19690
CA264_19695: CA264_19695 - DNA recombination/repair protein RecA, at 4,546,526 to 4,547,572
_19695
CA264_19700: CA264_19700 - hypothetical protein, at 4,547,826 to 4,548,884
_19700
Position (kb)
4546
4547
4548 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4545.577 kb on + strand at 4545.578 kb on - strand at 4545.807 kb on - strand, within CA264_19690 at 4545.848 kb on - strand, within CA264_19690 at 4545.852 kb on + strand, within CA264_19690 at 4545.909 kb on - strand, within CA264_19690 at 4545.909 kb on - strand, within CA264_19690 at 4545.957 kb on - strand, within CA264_19690 at 4545.957 kb on - strand, within CA264_19690 at 4545.976 kb on - strand, within CA264_19690 at 4546.008 kb on + strand, within CA264_19690 at 4546.008 kb on + strand, within CA264_19690 at 4546.022 kb on + strand, within CA264_19690 at 4546.023 kb on - strand, within CA264_19690 at 4546.060 kb on + strand, within CA264_19690 at 4546.064 kb on + strand, within CA264_19690 at 4546.064 kb on + strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.130 kb on + strand, within CA264_19690 at 4546.130 kb on + strand, within CA264_19690 at 4546.181 kb on + strand, within CA264_19690 at 4546.228 kb on + strand, within CA264_19690 at 4546.230 kb on + strand, within CA264_19690 at 4546.231 kb on - strand, within CA264_19690 at 4546.234 kb on + strand, within CA264_19690 at 4546.234 kb on + strand, within CA264_19690 at 4546.235 kb on - strand, within CA264_19690 at 4546.320 kb on - strand at 4546.348 kb on + strand at 4546.348 kb on + strand at 4546.387 kb on + strand at 4546.442 kb on + strand at 4546.499 kb on + strand at 4546.503 kb on + strand at 4547.595 kb on - strand at 4547.596 kb on + strand at 4547.688 kb on - strand at 4547.773 kb on + strand at 4547.773 kb on + strand at 4547.773 kb on + strand at 4547.773 kb on + strand at 4547.774 kb on - strand at 4547.777 kb on + strand at 4547.777 kb on + strand at 4547.778 kb on - strand at 4547.902 kb on - strand at 4547.926 kb on - strand at 4547.927 kb on + strand at 4547.983 kb on + strand, within CA264_19700 at 4547.984 kb on - strand, within CA264_19700 at 4547.984 kb on - strand, within CA264_19700 at 4548.056 kb on + strand, within CA264_19700 at 4548.127 kb on - strand, within CA264_19700 at 4548.130 kb on + strand, within CA264_19700 at 4548.278 kb on - strand, within CA264_19700 at 4548.504 kb on + strand, within CA264_19700 at 4548.505 kb on - strand, within CA264_19700 at 4548.570 kb on + strand, within CA264_19700
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,545,577 + +1.0 4,545,578 - +0.8 4,545,807 - CA264_19690 0.33 +1.0 4,545,848 - CA264_19690 0.38 +0.1 4,545,852 + CA264_19690 0.39 +0.1 4,545,909 - CA264_19690 0.46 +0.2 4,545,909 - CA264_19690 0.46 +0.0 4,545,957 - CA264_19690 0.52 -1.2 4,545,957 - CA264_19690 0.52 +0.4 4,545,976 - CA264_19690 0.54 +0.1 4,546,008 + CA264_19690 0.58 +0.6 4,546,008 + CA264_19690 0.58 +0.3 4,546,022 + CA264_19690 0.60 +0.6 4,546,023 - CA264_19690 0.60 -0.4 4,546,060 + CA264_19690 0.64 -0.3 4,546,064 + CA264_19690 0.65 -0.3 4,546,064 + CA264_19690 0.65 -0.1 4,546,065 - CA264_19690 0.65 +0.6 4,546,065 - CA264_19690 0.65 +0.2 4,546,065 - CA264_19690 0.65 +0.3 4,546,065 - CA264_19690 0.65 -0.1 4,546,130 + CA264_19690 0.73 +0.8 4,546,130 + CA264_19690 0.73 -0.5 4,546,181 + CA264_19690 0.79 +1.4 4,546,228 + CA264_19690 0.85 +0.5 4,546,230 + CA264_19690 0.85 +0.5 4,546,231 - CA264_19690 0.85 -1.0 4,546,234 + CA264_19690 0.86 -1.1 4,546,234 + CA264_19690 0.86 -1.1 4,546,235 - CA264_19690 0.86 +0.2 4,546,320 - +0.8 4,546,348 + +0.1 4,546,348 + +0.4 4,546,387 + +0.6 4,546,442 + -0.2 4,546,499 + -0.7 4,546,503 + -1.1 4,547,595 - +0.4 4,547,596 + -0.3 4,547,688 - -0.4 4,547,773 + +0.2 4,547,773 + -3.1 4,547,773 + +0.1 4,547,773 + +1.6 4,547,774 - +0.3 4,547,777 + +0.4 4,547,777 + +0.4 4,547,778 - -0.7 4,547,902 - +0.1 4,547,926 - -1.1 4,547,927 + -0.0 4,547,983 + CA264_19700 0.15 +0.8 4,547,984 - CA264_19700 0.15 +0.6 4,547,984 - CA264_19700 0.15 -0.1 4,548,056 + CA264_19700 0.22 -0.8 4,548,127 - CA264_19700 0.28 +0.5 4,548,130 + CA264_19700 0.29 +0.3 4,548,278 - CA264_19700 0.43 +0.5 4,548,504 + CA264_19700 0.64 +0.5 4,548,505 - CA264_19700 0.64 +0.2 4,548,570 + CA264_19700 0.70 -0.7
Or see this region's nucleotide sequence