Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19430 and CA264_19435 are separated by 5 nucleotides CA264_19435 and CA264_19440 are separated by 2 nucleotides CA264_19440 and CA264_19445 are separated by 9 nucleotides CA264_19445 and CA264_19450 are separated by 3 nucleotides CA264_19450 and CA264_19455 are separated by 0 nucleotides
CA264_19430: CA264_19430 - 30S ribosomal protein S5, at 4,496,214 to 4,496,732
_19430
CA264_19435: CA264_19435 - 50S ribosomal protein L30, at 4,496,738 to 4,496,917
_19435
CA264_19440: CA264_19440 - 50S ribosomal protein L15, at 4,496,920 to 4,497,366
_19440
CA264_19445: CA264_19445 - preprotein translocase subunit SecY, at 4,497,376 to 4,498,692
_19445
CA264_19450: CA264_19450 - type I methionyl aminopeptidase, at 4,498,696 to 4,499,469
_19450
CA264_19455: CA264_19455 - translation initiation factor IF-1, at 4,499,470 to 4,499,688
_19455
Position (kb)
4497
4498
4499 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4498.656 kb on - strand at 4498.690 kb on + strand at 4498.691 kb on - strand at 4498.700 kb on + strand at 4498.919 kb on + strand, within CA264_19450 at 4498.938 kb on + strand, within CA264_19450 at 4498.943 kb on - strand, within CA264_19450 at 4499.030 kb on + strand, within CA264_19450 at 4499.086 kb on + strand, within CA264_19450 at 4499.132 kb on + strand, within CA264_19450 at 4499.132 kb on + strand, within CA264_19450 at 4499.133 kb on - strand, within CA264_19450 at 4499.172 kb on + strand, within CA264_19450 at 4499.172 kb on + strand, within CA264_19450 at 4499.242 kb on + strand, within CA264_19450 at 4499.306 kb on + strand, within CA264_19450 at 4499.325 kb on + strand, within CA264_19450 at 4499.325 kb on + strand, within CA264_19450 at 4499.406 kb on - strand at 4499.447 kb on + strand at 4499.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,498,656 - -0.4 4,498,690 + +0.2 4,498,691 - +1.1 4,498,700 + +1.1 4,498,919 + CA264_19450 0.29 +0.6 4,498,938 + CA264_19450 0.31 +0.9 4,498,943 - CA264_19450 0.32 -1.0 4,499,030 + CA264_19450 0.43 +1.1 4,499,086 + CA264_19450 0.50 +1.1 4,499,132 + CA264_19450 0.56 +0.3 4,499,132 + CA264_19450 0.56 +2.9 4,499,133 - CA264_19450 0.56 -0.3 4,499,172 + CA264_19450 0.61 +0.6 4,499,172 + CA264_19450 0.61 +0.4 4,499,242 + CA264_19450 0.71 -0.6 4,499,306 + CA264_19450 0.79 -0.0 4,499,325 + CA264_19450 0.81 -0.0 4,499,325 + CA264_19450 0.81 -0.1 4,499,406 - -0.6 4,499,447 + +0.6 4,499,448 - -0.3
Or see this region's nucleotide sequence