Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18485

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18480 and CA264_18485 are separated by 632 nucleotidesCA264_18485 and CA264_18490 are separated by 106 nucleotides CA264_18480: CA264_18480 - hypothetical protein, at 4,297,957 to 4,298,256 _18480 CA264_18485: CA264_18485 - 2-oxoglutarate dehydrogenase subunit E1, at 4,298,889 to 4,301,645 _18485 CA264_18490: CA264_18490 - dihydrolipoamide succinyltransferase, at 4,301,752 to 4,303,326 _18490 Position (kb) 4298 4299 4300 4301 4302Strain fitness (log2 ratio) -2 -1 0 1at 4297.892 kb on + strandat 4297.894 kb on + strandat 4297.894 kb on + strandat 4297.894 kb on + strandat 4297.894 kb on + strandat 4297.894 kb on + strandat 4297.894 kb on + strandat 4297.895 kb on - strandat 4297.895 kb on - strandat 4297.921 kb on - strandat 4297.940 kb on - strandat 4297.940 kb on - strandat 4297.970 kb on + strandat 4297.970 kb on + strandat 4298.069 kb on + strand, within CA264_18480at 4298.252 kb on + strandat 4298.252 kb on + strandat 4298.253 kb on - strandat 4298.253 kb on - strandat 4298.253 kb on - strandat 4298.253 kb on - strandat 4298.253 kb on - strandat 4298.253 kb on - strandat 4298.256 kb on + strandat 4298.256 kb on + strandat 4298.256 kb on + strandat 4298.257 kb on - strandat 4298.350 kb on - strandat 4298.359 kb on + strandat 4298.360 kb on - strandat 4298.436 kb on - strandat 4298.456 kb on + strandat 4298.465 kb on - strandat 4298.466 kb on + strandat 4298.467 kb on - strandat 4298.467 kb on - strandat 4298.507 kb on + strandat 4298.508 kb on - strandat 4298.557 kb on + strandat 4298.665 kb on + strandat 4298.666 kb on - strandat 4298.671 kb on - strandat 4298.671 kb on - strandat 4298.716 kb on + strandat 4298.771 kb on - strandat 4298.786 kb on - strandat 4298.788 kb on - strandat 4298.788 kb on - strandat 4298.788 kb on - strandat 4298.878 kb on + strandat 4301.623 kb on + strandat 4301.643 kb on + strandat 4301.644 kb on - strandat 4301.649 kb on + strandat 4301.649 kb on + strandat 4301.661 kb on - strandat 4301.661 kb on - strandat 4301.661 kb on - strandat 4301.661 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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4,297,892 + -1.2
4,297,894 + -2.2
4,297,894 + +0.8
4,297,894 + +0.1
4,297,894 + -0.6
4,297,894 + +0.5
4,297,894 + -0.4
4,297,895 - +0.4
4,297,895 - +0.7
4,297,921 - -0.1
4,297,940 - -0.4
4,297,940 - -0.3
4,297,970 + -0.5
4,297,970 + -0.3
4,298,069 + CA264_18480 0.37 -1.0
4,298,252 + +0.1
4,298,252 + -0.9
4,298,253 - +1.6
4,298,253 - -1.1
4,298,253 - +0.0
4,298,253 - -0.7
4,298,253 - -2.3
4,298,253 - -0.6
4,298,256 + -1.1
4,298,256 + +0.4
4,298,256 + -0.7
4,298,257 - -1.5
4,298,350 - -0.3
4,298,359 + +0.1
4,298,360 - -0.4
4,298,436 - -0.1
4,298,456 + +1.0
4,298,465 - -0.1
4,298,466 + -0.1
4,298,467 - -0.2
4,298,467 - -0.7
4,298,507 + -1.0
4,298,508 - +0.8
4,298,557 + +0.0
4,298,665 + +0.3
4,298,666 - -1.0
4,298,671 - -0.4
4,298,671 - -0.9
4,298,716 + -0.6
4,298,771 - -0.1
4,298,786 - -1.1
4,298,788 - -0.4
4,298,788 - -1.3
4,298,788 - -0.2
4,298,878 + -1.6
4,301,623 + +0.1
4,301,643 + +0.0
4,301,644 - -0.3
4,301,649 + +0.1
4,301,649 + -0.2
4,301,661 - +1.0
4,301,661 - -0.2
4,301,661 - -0.1
4,301,661 - -0.5

Or see this region's nucleotide sequence