Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17815 and CA264_17820 are separated by 13 nucleotides CA264_17820 and CA264_17825 are separated by 56 nucleotides
CA264_17815: CA264_17815 - hypothetical protein, at 4,142,169 to 4,143,347
_17815
CA264_17820: CA264_17820 - amino acid dehydrogenase, at 4,143,361 to 4,144,593
_17820
CA264_17825: CA264_17825 - anhydro-N-acetylmuramic acid kinase, at 4,144,650 to 4,145,723
_17825
Position (kb)
4143
4144
4145 Strain fitness (log2 ratio)
-2
-1
0
1 at 4142.365 kb on + strand, within CA264_17815 at 4142.366 kb on - strand, within CA264_17815 at 4142.449 kb on - strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.453 kb on - strand, within CA264_17815 at 4142.460 kb on + strand, within CA264_17815 at 4142.472 kb on - strand, within CA264_17815 at 4142.503 kb on + strand, within CA264_17815 at 4142.504 kb on - strand, within CA264_17815 at 4143.074 kb on - strand, within CA264_17815 at 4143.135 kb on + strand, within CA264_17815 at 4143.136 kb on - strand, within CA264_17815 at 4143.240 kb on - strand at 4143.275 kb on - strand at 4143.348 kb on - strand at 4143.348 kb on - strand at 4143.362 kb on + strand at 4143.468 kb on + strand at 4143.481 kb on - strand at 4143.760 kb on + strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.891 kb on + strand, within CA264_17820 at 4143.961 kb on + strand, within CA264_17820 at 4144.065 kb on + strand, within CA264_17820 at 4144.304 kb on + strand, within CA264_17820 at 4144.353 kb on + strand, within CA264_17820 at 4144.395 kb on + strand, within CA264_17820 at 4144.395 kb on + strand, within CA264_17820
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,142,365 + CA264_17815 0.17 -0.4 4,142,366 - CA264_17815 0.17 -0.3 4,142,449 - CA264_17815 0.24 -0.3 4,142,452 + CA264_17815 0.24 -1.9 4,142,452 + CA264_17815 0.24 +1.6 4,142,453 - CA264_17815 0.24 -0.5 4,142,460 + CA264_17815 0.25 -0.7 4,142,472 - CA264_17815 0.26 +0.7 4,142,503 + CA264_17815 0.28 -0.7 4,142,504 - CA264_17815 0.28 +0.3 4,143,074 - CA264_17815 0.77 -0.1 4,143,135 + CA264_17815 0.82 -1.2 4,143,136 - CA264_17815 0.82 +0.7 4,143,240 - +0.3 4,143,275 - -0.8 4,143,348 - +1.3 4,143,348 - -1.0 4,143,362 + -0.8 4,143,468 + -0.5 4,143,481 - -0.2 4,143,760 + CA264_17820 0.32 -1.1 4,143,887 - CA264_17820 0.43 -0.5 4,143,887 - CA264_17820 0.43 -0.0 4,143,891 + CA264_17820 0.43 -0.8 4,143,961 + CA264_17820 0.49 -1.9 4,144,065 + CA264_17820 0.57 -1.6 4,144,304 + CA264_17820 0.76 -1.4 4,144,353 + CA264_17820 0.80 +1.0 4,144,395 + CA264_17820 0.84 -2.3 4,144,395 + CA264_17820 0.84 -2.0
Or see this region's nucleotide sequence