Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17500 and CA264_17505 are separated by 12 nucleotides CA264_17505 and CA264_17510 are separated by 99 nucleotides CA264_17510 and CA264_17515 are separated by 4 nucleotides CA264_17515 and CA264_17520 overlap by 8 nucleotides
CA264_17500: CA264_17500 - molecular chaperone DnaK, at 4,077,216 to 4,077,605
_17500
CA264_17505: CA264_17505 - SMC-Scp complex subunit ScpB, at 4,077,618 to 4,078,181
_17505
CA264_17510: CA264_17510 - pseudouridylate synthase, at 4,078,281 to 4,079,909
_17510
CA264_17515: CA264_17515 - type III pantothenate kinase, at 4,079,914 to 4,080,633
_17515
CA264_17520: CA264_17520 - hypothetical protein, at 4,080,626 to 4,081,921
_17520
Position (kb)
4078
4079
4080 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4077.314 kb on - strand, within CA264_17500 at 4077.502 kb on - strand, within CA264_17500 at 4077.517 kb on + strand, within CA264_17500 at 4077.596 kb on + strand at 4077.860 kb on - strand, within CA264_17505 at 4077.860 kb on - strand, within CA264_17505 at 4077.926 kb on + strand, within CA264_17505 at 4078.031 kb on - strand, within CA264_17505 at 4078.208 kb on - strand at 4078.209 kb on + strand at 4078.210 kb on - strand at 4078.230 kb on + strand at 4078.231 kb on - strand at 4078.272 kb on + strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.276 kb on + strand at 4078.276 kb on + strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.472 kb on + strand, within CA264_17510 at 4078.473 kb on - strand, within CA264_17510 at 4078.482 kb on - strand, within CA264_17510 at 4078.942 kb on - strand, within CA264_17510 at 4079.349 kb on + strand, within CA264_17510 at 4079.350 kb on - strand, within CA264_17510 at 4079.350 kb on - strand, within CA264_17510 at 4079.480 kb on + strand, within CA264_17510 at 4079.588 kb on + strand, within CA264_17510 at 4079.589 kb on - strand, within CA264_17510 at 4079.609 kb on - strand, within CA264_17510 at 4079.641 kb on - strand, within CA264_17510 at 4079.645 kb on + strand, within CA264_17510 at 4079.899 kb on - strand at 4079.899 kb on - strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,077,314 - CA264_17500 0.25 -0.4 4,077,502 - CA264_17500 0.73 -0.5 4,077,517 + CA264_17500 0.77 -0.5 4,077,596 + -1.3 4,077,860 - CA264_17505 0.43 -1.2 4,077,860 - CA264_17505 0.43 +0.1 4,077,926 + CA264_17505 0.55 -0.1 4,078,031 - CA264_17505 0.73 +1.0 4,078,208 - +0.4 4,078,209 + -0.9 4,078,210 - -1.1 4,078,230 + -1.5 4,078,231 - -1.1 4,078,272 + +0.4 4,078,273 - -1.4 4,078,273 - -0.0 4,078,273 - -0.7 4,078,273 - -0.8 4,078,273 - +0.8 4,078,276 + -0.6 4,078,276 + +0.2 4,078,277 - -0.2 4,078,277 - +0.8 4,078,277 - -1.0 4,078,472 + CA264_17510 0.12 +0.6 4,078,473 - CA264_17510 0.12 +1.0 4,078,482 - CA264_17510 0.12 +0.6 4,078,942 - CA264_17510 0.41 +1.1 4,079,349 + CA264_17510 0.66 +0.8 4,079,350 - CA264_17510 0.66 +0.9 4,079,350 - CA264_17510 0.66 +1.6 4,079,480 + CA264_17510 0.74 +0.9 4,079,588 + CA264_17510 0.80 +0.3 4,079,589 - CA264_17510 0.80 -0.4 4,079,609 - CA264_17510 0.82 +0.8 4,079,641 - CA264_17510 0.83 +1.4 4,079,645 + CA264_17510 0.84 +1.3 4,079,899 - -0.6 4,079,899 - -0.4 4,080,624 + -0.6 4,080,624 + -1.7 4,080,624 + -2.2 4,080,624 + -1.3 4,080,624 + -3.5
Or see this region's nucleotide sequence