Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17325 and CA264_17330 are separated by 136 nucleotides CA264_17330 and CA264_17335 are separated by 415 nucleotides
CA264_17325: CA264_17325 - isoleucine--tRNA ligase, at 4,036,291 to 4,039,644
_17325
CA264_17330: CA264_17330 - lipoprotein signal peptidase, at 4,039,781 to 4,040,404
_17330
CA264_17335: CA264_17335 - HAD family hydrolase, at 4,040,820 to 4,041,425
_17335
Position (kb)
4039
4040
4041 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4039.646 kb on + strand at 4039.678 kb on + strand at 4039.692 kb on + strand at 4039.693 kb on - strand at 4039.694 kb on + strand at 4039.717 kb on + strand at 4039.720 kb on + strand at 4039.721 kb on - strand at 4039.742 kb on - strand at 4039.742 kb on - strand at 4039.749 kb on - strand at 4039.769 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.427 kb on - strand at 4040.490 kb on + strand at 4040.523 kb on + strand at 4040.532 kb on - strand at 4040.560 kb on + strand at 4040.560 kb on + strand at 4040.573 kb on - strand at 4040.573 kb on - strand at 4040.575 kb on - strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.615 kb on - strand at 4040.741 kb on + strand at 4040.744 kb on - strand at 4041.109 kb on + strand, within CA264_17335 at 4041.113 kb on + strand, within CA264_17335 at 4041.114 kb on - strand, within CA264_17335 at 4041.159 kb on - strand, within CA264_17335 at 4041.200 kb on - strand, within CA264_17335 at 4041.209 kb on + strand, within CA264_17335 at 4041.210 kb on - strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.247 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,039,646 + +0.8 4,039,678 + -0.4 4,039,692 + +0.6 4,039,693 - +0.4 4,039,694 + +0.3 4,039,717 + +0.8 4,039,720 + +1.6 4,039,721 - +0.9 4,039,742 - -0.5 4,039,742 - +0.8 4,039,749 - +0.2 4,039,769 + +0.4 4,040,410 + +0.8 4,040,410 + -0.4 4,040,410 + -0.8 4,040,427 - -3.0 4,040,490 + -0.4 4,040,523 + -1.6 4,040,532 - -0.3 4,040,560 + -0.0 4,040,560 + +0.7 4,040,573 - -1.3 4,040,573 - +0.5 4,040,575 - +0.6 4,040,614 + -0.0 4,040,614 + -0.0 4,040,614 + -0.4 4,040,615 - +1.0 4,040,741 + +0.7 4,040,744 - +0.2 4,041,109 + CA264_17335 0.48 -1.3 4,041,113 + CA264_17335 0.48 +0.3 4,041,114 - CA264_17335 0.49 -0.4 4,041,159 - CA264_17335 0.56 -1.0 4,041,200 - CA264_17335 0.63 -0.0 4,041,209 + CA264_17335 0.64 -0.5 4,041,210 - CA264_17335 0.64 -0.6 4,041,246 + CA264_17335 0.70 -0.6 4,041,246 + CA264_17335 0.70 +0.2 4,041,247 - CA264_17335 0.70 +0.5 4,041,326 - CA264_17335 0.83 -0.3 4,041,326 - CA264_17335 0.83 -0.5 4,041,328 - CA264_17335 0.84 -0.2 4,041,328 - CA264_17335 0.84 -0.4 4,041,328 - CA264_17335 0.84 -0.5
Or see this region's nucleotide sequence