Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15955 and CA264_15960 are separated by 96 nucleotides CA264_15960 and CA264_15965 are separated by 2 nucleotides CA264_15965 and CA264_15970 are separated by 60 nucleotides CA264_15970 and CA264_15975 are separated by 28 nucleotides CA264_15975 and CA264_15980 overlap by 4 nucleotides
CA264_15955: CA264_15955 - glycine C-acetyltransferase, at 3,721,543 to 3,722,733
_15955
CA264_15960: CA264_15960 - hypothetical protein, at 3,722,830 to 3,723,117
_15960
CA264_15965: CA264_15965 - hypothetical protein, at 3,723,120 to 3,723,326
_15965
CA264_15970: CA264_15970 - hypothetical protein, at 3,723,387 to 3,723,578
_15970
CA264_15975: CA264_15975 - TIGR00159 family protein, at 3,723,607 to 3,724,446
_15975
CA264_15980: CA264_15980 - dihydropteroate synthase, at 3,724,443 to 3,725,300
_15980
Position (kb)
3723
3724 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3722.429 kb on + strand, within CA264_15955 at 3722.587 kb on + strand, within CA264_15955 at 3722.588 kb on - strand, within CA264_15955 at 3722.602 kb on + strand, within CA264_15955 at 3722.602 kb on + strand, within CA264_15955 at 3722.605 kb on + strand, within CA264_15955 at 3722.680 kb on - strand at 3722.706 kb on - strand at 3722.706 kb on - strand at 3722.798 kb on + strand at 3722.798 kb on + strand at 3722.805 kb on + strand at 3722.830 kb on - strand at 3722.836 kb on - strand at 3722.840 kb on + strand at 3722.840 kb on + strand at 3722.841 kb on - strand at 3722.841 kb on - strand at 3722.861 kb on + strand, within CA264_15960 at 3722.940 kb on + strand, within CA264_15960 at 3722.941 kb on - strand, within CA264_15960 at 3722.941 kb on - strand, within CA264_15960 at 3722.942 kb on + strand, within CA264_15960 at 3722.943 kb on - strand, within CA264_15960 at 3722.943 kb on - strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.948 kb on - strand, within CA264_15960 at 3722.965 kb on - strand, within CA264_15960 at 3722.965 kb on - strand, within CA264_15960 at 3722.971 kb on + strand, within CA264_15960 at 3723.002 kb on - strand, within CA264_15960 at 3723.018 kb on + strand, within CA264_15960 at 3723.111 kb on - strand at 3723.172 kb on - strand, within CA264_15965 at 3723.172 kb on - strand, within CA264_15965 at 3723.172 kb on - strand, within CA264_15965 at 3723.254 kb on - strand, within CA264_15965 at 3723.265 kb on + strand, within CA264_15965 at 3723.266 kb on - strand, within CA264_15965 at 3723.289 kb on - strand, within CA264_15965 at 3723.298 kb on + strand, within CA264_15965 at 3723.303 kb on + strand, within CA264_15965 at 3723.324 kb on + strand at 3723.324 kb on + strand at 3723.386 kb on + strand at 3723.391 kb on + strand at 3723.436 kb on + strand, within CA264_15970 at 3723.436 kb on + strand, within CA264_15970 at 3723.437 kb on - strand, within CA264_15970 at 3723.516 kb on + strand, within CA264_15970 at 3723.542 kb on - strand, within CA264_15970 at 3723.546 kb on + strand, within CA264_15970 at 3723.546 kb on + strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.551 kb on - strand, within CA264_15970 at 3723.551 kb on - strand, within CA264_15970 at 3723.576 kb on + strand at 3723.587 kb on - strand at 3723.591 kb on + strand at 3723.608 kb on + strand at 3723.609 kb on - strand at 3723.609 kb on - strand at 3724.426 kb on + strand at 3724.467 kb on + strand at 3724.468 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,722,429 + CA264_15955 0.74 +3.5 3,722,587 + CA264_15955 0.88 +0.6 3,722,588 - CA264_15955 0.88 +0.3 3,722,602 + CA264_15955 0.89 +0.4 3,722,602 + CA264_15955 0.89 +1.0 3,722,605 + CA264_15955 0.89 +0.0 3,722,680 - +0.5 3,722,706 - -0.0 3,722,706 - +0.3 3,722,798 + -0.0 3,722,798 + +2.2 3,722,805 + +1.2 3,722,830 - -0.8 3,722,836 - -0.3 3,722,840 + +0.3 3,722,840 + +1.1 3,722,841 - +0.9 3,722,841 - +0.4 3,722,861 + CA264_15960 0.11 +0.4 3,722,940 + CA264_15960 0.38 +0.4 3,722,941 - CA264_15960 0.39 -0.5 3,722,941 - CA264_15960 0.39 +1.2 3,722,942 + CA264_15960 0.39 +0.7 3,722,943 - CA264_15960 0.39 +0.1 3,722,943 - CA264_15960 0.39 -0.1 3,722,947 + CA264_15960 0.41 +0.8 3,722,947 + CA264_15960 0.41 +0.8 3,722,947 + CA264_15960 0.41 +1.1 3,722,948 - CA264_15960 0.41 -1.0 3,722,965 - CA264_15960 0.47 -0.7 3,722,965 - CA264_15960 0.47 +0.9 3,722,971 + CA264_15960 0.49 +0.5 3,723,002 - CA264_15960 0.60 -0.4 3,723,018 + CA264_15960 0.65 +1.0 3,723,111 - -0.2 3,723,172 - CA264_15965 0.25 -0.5 3,723,172 - CA264_15965 0.25 +0.3 3,723,172 - CA264_15965 0.25 +1.9 3,723,254 - CA264_15965 0.65 +0.3 3,723,265 + CA264_15965 0.70 +1.0 3,723,266 - CA264_15965 0.71 -1.3 3,723,289 - CA264_15965 0.82 +0.5 3,723,298 + CA264_15965 0.86 +1.6 3,723,303 + CA264_15965 0.88 +1.0 3,723,324 + -0.3 3,723,324 + +0.5 3,723,386 + +0.4 3,723,391 + +2.1 3,723,436 + CA264_15970 0.26 +0.9 3,723,436 + CA264_15970 0.26 +0.4 3,723,437 - CA264_15970 0.26 +0.6 3,723,516 + CA264_15970 0.67 +1.0 3,723,542 - CA264_15970 0.81 +0.2 3,723,546 + CA264_15970 0.83 +0.9 3,723,546 + CA264_15970 0.83 +1.7 3,723,547 - CA264_15970 0.83 +0.4 3,723,547 - CA264_15970 0.83 +0.9 3,723,547 - CA264_15970 0.83 -1.9 3,723,551 - CA264_15970 0.85 +0.4 3,723,551 - CA264_15970 0.85 +0.1 3,723,576 + +0.6 3,723,587 - +0.2 3,723,591 + -1.2 3,723,608 + -1.0 3,723,609 - +0.7 3,723,609 - +0.5 3,724,426 + -1.2 3,724,467 + +0.1 3,724,468 - -0.5
Or see this region's nucleotide sequence