Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15935 and CA264_15940 are separated by 113 nucleotides CA264_15940 and CA264_15945 are separated by 236 nucleotides CA264_15945 and CA264_15950 are separated by 404 nucleotides
CA264_15935: CA264_15935 - hypothetical protein, at 3,717,118 to 3,717,846
_15935
CA264_15940: CA264_15940 - hypothetical protein, at 3,717,960 to 3,718,601
_15940
CA264_15945: CA264_15945 - NAD-dependent epimerase, at 3,718,838 to 3,719,812
_15945
CA264_15950: CA264_15950 - hypothetical protein, at 3,720,217 to 3,721,500
_15950
Position (kb)
3718
3719
3720 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3717.839 kb on - strand at 3717.851 kb on + strand at 3717.852 kb on - strand at 3717.868 kb on - strand at 3717.868 kb on - strand at 3717.869 kb on + strand at 3717.877 kb on - strand at 3717.877 kb on - strand at 3717.893 kb on + strand at 3717.961 kb on + strand at 3718.034 kb on + strand, within CA264_15940 at 3718.035 kb on - strand, within CA264_15940 at 3718.035 kb on - strand, within CA264_15940 at 3718.118 kb on - strand, within CA264_15940 at 3718.135 kb on + strand, within CA264_15940 at 3718.136 kb on - strand, within CA264_15940 at 3718.178 kb on - strand, within CA264_15940 at 3718.178 kb on - strand, within CA264_15940 at 3718.221 kb on + strand, within CA264_15940 at 3718.222 kb on - strand, within CA264_15940 at 3718.279 kb on + strand, within CA264_15940 at 3718.379 kb on - strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.385 kb on - strand, within CA264_15940 at 3718.588 kb on - strand at 3718.608 kb on - strand at 3718.609 kb on + strand at 3718.609 kb on + strand at 3718.626 kb on - strand at 3718.640 kb on + strand at 3718.640 kb on + strand at 3718.649 kb on + strand at 3718.649 kb on + strand at 3718.649 kb on + strand at 3718.650 kb on - strand at 3718.651 kb on + strand at 3718.651 kb on + strand at 3718.652 kb on - strand at 3718.652 kb on - strand at 3718.654 kb on + strand at 3718.654 kb on + strand at 3718.654 kb on + strand at 3718.655 kb on - strand at 3718.655 kb on - strand at 3718.656 kb on + strand at 3718.657 kb on - strand at 3718.658 kb on + strand at 3718.659 kb on - strand at 3718.662 kb on - strand at 3718.662 kb on - strand at 3718.734 kb on + strand at 3718.771 kb on + strand at 3718.822 kb on - strand at 3718.829 kb on + strand at 3718.839 kb on + strand at 3718.840 kb on - strand at 3718.906 kb on + strand at 3718.906 kb on + strand at 3718.952 kb on + strand, within CA264_15945 at 3718.952 kb on + strand, within CA264_15945 at 3718.953 kb on - strand, within CA264_15945 at 3719.001 kb on + strand, within CA264_15945 at 3719.141 kb on + strand, within CA264_15945 at 3719.157 kb on + strand, within CA264_15945 at 3719.157 kb on + strand, within CA264_15945 at 3719.158 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.226 kb on + strand, within CA264_15945 at 3719.226 kb on + strand, within CA264_15945 at 3719.227 kb on - strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.231 kb on - strand, within CA264_15945 at 3719.231 kb on - strand, within CA264_15945 at 3719.272 kb on + strand, within CA264_15945 at 3719.272 kb on + strand, within CA264_15945 at 3719.335 kb on - strand, within CA264_15945 at 3719.373 kb on + strand, within CA264_15945 at 3719.503 kb on + strand, within CA264_15945 at 3719.504 kb on - strand, within CA264_15945 at 3719.727 kb on + strand at 3719.728 kb on - strand at 3719.728 kb on - strand at 3719.728 kb on - strand at 3719.763 kb on - strand at 3719.817 kb on + strand at 3719.817 kb on + strand at 3719.818 kb on - strand at 3719.970 kb on - strand at 3719.970 kb on - strand at 3719.974 kb on - strand at 3719.979 kb on - strand at 3719.979 kb on - strand at 3720.012 kb on + strand at 3720.013 kb on - strand at 3720.061 kb on - strand at 3720.065 kb on - strand at 3720.065 kb on - strand at 3720.067 kb on + strand at 3720.068 kb on - strand at 3720.078 kb on + strand at 3720.125 kb on + strand at 3720.126 kb on - strand at 3720.126 kb on - strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.161 kb on - strand at 3720.161 kb on - strand at 3720.161 kb on - strand at 3720.165 kb on - strand at 3720.165 kb on - strand at 3720.165 kb on - strand at 3720.190 kb on + strand at 3720.194 kb on + strand at 3720.216 kb on + strand at 3720.217 kb on - strand at 3720.347 kb on + strand, within CA264_15950 at 3720.584 kb on + strand, within CA264_15950 at 3720.681 kb on - strand, within CA264_15950 at 3720.685 kb on - strand, within CA264_15950 at 3720.777 kb on - strand, within CA264_15950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,717,839 - +1.4 3,717,851 + -0.8 3,717,852 - -0.2 3,717,868 - -0.3 3,717,868 - +0.3 3,717,869 + +0.8 3,717,877 - +0.3 3,717,877 - -0.6 3,717,893 + +2.2 3,717,961 + -1.3 3,718,034 + CA264_15940 0.12 +0.1 3,718,035 - CA264_15940 0.12 +0.7 3,718,035 - CA264_15940 0.12 -0.2 3,718,118 - CA264_15940 0.25 +1.5 3,718,135 + CA264_15940 0.27 -0.1 3,718,136 - CA264_15940 0.27 +0.2 3,718,178 - CA264_15940 0.34 -0.1 3,718,178 - CA264_15940 0.34 +0.1 3,718,221 + CA264_15940 0.41 +0.4 3,718,222 - CA264_15940 0.41 +1.5 3,718,279 + CA264_15940 0.50 +0.0 3,718,379 - CA264_15940 0.65 +0.2 3,718,384 + CA264_15940 0.66 -0.5 3,718,384 + CA264_15940 0.66 +0.1 3,718,384 + CA264_15940 0.66 +0.3 3,718,384 + CA264_15940 0.66 +0.2 3,718,384 + CA264_15940 0.66 -0.2 3,718,385 - CA264_15940 0.66 +1.7 3,718,588 - +0.2 3,718,608 - +0.7 3,718,609 + -0.1 3,718,609 + -0.2 3,718,626 - +0.2 3,718,640 + -0.2 3,718,640 + -0.9 3,718,649 + +0.1 3,718,649 + +2.5 3,718,649 + +0.4 3,718,650 - +0.8 3,718,651 + +0.5 3,718,651 + +0.5 3,718,652 - -1.4 3,718,652 - -0.6 3,718,654 + +0.1 3,718,654 + +0.1 3,718,654 + +0.0 3,718,655 - -1.2 3,718,655 - -0.3 3,718,656 + -0.1 3,718,657 - +1.1 3,718,658 + +1.4 3,718,659 - +0.0 3,718,662 - -0.6 3,718,662 - +0.4 3,718,734 + -0.4 3,718,771 + +1.1 3,718,822 - +0.2 3,718,829 + -0.3 3,718,839 + -0.4 3,718,840 - +1.4 3,718,906 + +1.5 3,718,906 + +1.5 3,718,952 + CA264_15945 0.12 -0.5 3,718,952 + CA264_15945 0.12 +1.8 3,718,953 - CA264_15945 0.12 +0.7 3,719,001 + CA264_15945 0.17 +0.8 3,719,141 + CA264_15945 0.31 -1.3 3,719,157 + CA264_15945 0.33 +0.2 3,719,157 + CA264_15945 0.33 +0.1 3,719,158 - CA264_15945 0.33 +0.4 3,719,173 - CA264_15945 0.34 +0.2 3,719,173 - CA264_15945 0.34 +1.1 3,719,173 - CA264_15945 0.34 +0.6 3,719,173 - CA264_15945 0.34 +0.5 3,719,173 - CA264_15945 0.34 +0.7 3,719,226 + CA264_15945 0.40 +0.4 3,719,226 + CA264_15945 0.40 -0.3 3,719,227 - CA264_15945 0.40 +0.5 3,719,230 + CA264_15945 0.40 +0.7 3,719,230 + CA264_15945 0.40 +0.4 3,719,230 + CA264_15945 0.40 +0.6 3,719,231 - CA264_15945 0.40 +0.9 3,719,231 - CA264_15945 0.40 +0.9 3,719,272 + CA264_15945 0.45 +0.5 3,719,272 + CA264_15945 0.45 +0.7 3,719,335 - CA264_15945 0.51 +0.2 3,719,373 + CA264_15945 0.55 +1.0 3,719,503 + CA264_15945 0.68 +1.3 3,719,504 - CA264_15945 0.68 +1.0 3,719,727 + +1.5 3,719,728 - -0.6 3,719,728 - +0.5 3,719,728 - +1.1 3,719,763 - +0.3 3,719,817 + -2.2 3,719,817 + -1.3 3,719,818 - +1.0 3,719,970 - -0.4 3,719,970 - -1.7 3,719,974 - +0.2 3,719,979 - -1.4 3,719,979 - -0.0 3,720,012 + +1.0 3,720,013 - +0.1 3,720,061 - +0.4 3,720,065 - +0.2 3,720,065 - -0.9 3,720,067 + -1.4 3,720,068 - +0.5 3,720,078 + -1.6 3,720,125 + -0.0 3,720,126 - -0.5 3,720,126 - -0.3 3,720,160 + -0.1 3,720,160 + -1.6 3,720,160 + -0.6 3,720,160 + -1.2 3,720,160 + +0.9 3,720,161 - -0.9 3,720,161 - -0.4 3,720,161 - +0.0 3,720,165 - -0.7 3,720,165 - -1.4 3,720,165 - -0.8 3,720,190 + -1.2 3,720,194 + -1.5 3,720,216 + -0.4 3,720,217 - +1.0 3,720,347 + CA264_15950 0.10 -0.6 3,720,584 + CA264_15950 0.29 -1.2 3,720,681 - CA264_15950 0.36 +1.5 3,720,685 - CA264_15950 0.36 -0.5 3,720,777 - CA264_15950 0.44 -0.8
Or see this region's nucleotide sequence