Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15885 and CA264_15890 are separated by 211 nucleotides CA264_15890 and CA264_15895 are separated by 204 nucleotides
CA264_15885: CA264_15885 - TetR family transcriptional regulator, at 3,708,132 to 3,708,665
_15885
CA264_15890: CA264_15890 - hypothetical protein, at 3,708,877 to 3,709,173
_15890
CA264_15895: CA264_15895 - hypothetical protein, at 3,709,378 to 3,710,541
_15895
Position (kb)
3708
3709
3710 Strain fitness (log2 ratio)
-1
0
1
2 at 3707.883 kb on + strand at 3707.913 kb on - strand at 3707.968 kb on + strand at 3708.010 kb on - strand at 3708.019 kb on - strand at 3708.034 kb on - strand at 3708.115 kb on - strand at 3708.120 kb on - strand at 3708.137 kb on + strand at 3708.251 kb on + strand, within CA264_15885 at 3708.253 kb on + strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.254 kb on - strand, within CA264_15885 at 3708.264 kb on + strand, within CA264_15885 at 3708.264 kb on + strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.265 kb on - strand, within CA264_15885 at 3708.269 kb on + strand, within CA264_15885 at 3708.269 kb on + strand, within CA264_15885 at 3708.654 kb on + strand at 3708.655 kb on - strand at 3708.664 kb on - strand at 3708.719 kb on + strand at 3708.720 kb on - strand at 3708.745 kb on + strand at 3708.767 kb on - strand at 3708.796 kb on + strand at 3708.799 kb on - strand at 3708.833 kb on + strand at 3708.834 kb on - strand at 3708.842 kb on + strand at 3708.867 kb on - strand at 3708.872 kb on + strand at 3708.873 kb on - strand at 3708.874 kb on + strand at 3708.874 kb on + strand at 3708.875 kb on - strand at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3708.968 kb on - strand, within CA264_15890 at 3709.005 kb on + strand, within CA264_15890 at 3709.006 kb on - strand, within CA264_15890 at 3709.020 kb on - strand, within CA264_15890 at 3709.106 kb on + strand, within CA264_15890 at 3709.106 kb on + strand, within CA264_15890 at 3709.127 kb on + strand, within CA264_15890 at 3709.128 kb on - strand, within CA264_15890 at 3709.132 kb on - strand, within CA264_15890 at 3709.179 kb on - strand at 3709.533 kb on + strand, within CA264_15895 at 3709.534 kb on - strand, within CA264_15895 at 3709.653 kb on + strand, within CA264_15895 at 3709.702 kb on + strand, within CA264_15895 at 3709.834 kb on - strand, within CA264_15895 at 3709.906 kb on + strand, within CA264_15895 at 3709.907 kb on - strand, within CA264_15895 at 3709.907 kb on - strand, within CA264_15895 at 3709.907 kb on - strand, within CA264_15895 at 3709.917 kb on + strand, within CA264_15895 at 3709.917 kb on + strand, within CA264_15895 at 3709.918 kb on - strand, within CA264_15895 at 3709.951 kb on - strand, within CA264_15895 at 3709.982 kb on + strand, within CA264_15895 at 3709.997 kb on + strand, within CA264_15895 at 3710.001 kb on + strand, within CA264_15895 at 3710.028 kb on - strand, within CA264_15895 at 3710.138 kb on + strand, within CA264_15895 at 3710.150 kb on + strand, within CA264_15895
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,707,883 + +0.2 3,707,913 - -0.4 3,707,968 + +0.0 3,708,010 - -1.6 3,708,019 - +0.2 3,708,034 - +0.5 3,708,115 - +0.2 3,708,120 - -1.0 3,708,137 + -1.3 3,708,251 + CA264_15885 0.22 +0.6 3,708,253 + CA264_15885 0.23 +1.1 3,708,254 - CA264_15885 0.23 +0.2 3,708,254 - CA264_15885 0.23 +1.2 3,708,254 - CA264_15885 0.23 +0.5 3,708,264 + CA264_15885 0.25 +0.3 3,708,264 + CA264_15885 0.25 +0.8 3,708,265 - CA264_15885 0.25 +0.4 3,708,265 - CA264_15885 0.25 +1.2 3,708,265 - CA264_15885 0.25 +0.6 3,708,269 + CA264_15885 0.26 +2.5 3,708,269 + CA264_15885 0.26 +1.0 3,708,654 + +1.5 3,708,655 - +0.6 3,708,664 - +0.2 3,708,719 + +0.3 3,708,720 - +1.3 3,708,745 + +0.2 3,708,767 - -0.2 3,708,796 + -0.7 3,708,799 - +0.3 3,708,833 + -0.2 3,708,834 - +0.4 3,708,842 + -0.8 3,708,867 - +0.2 3,708,872 + -0.0 3,708,873 - -0.7 3,708,874 + +0.3 3,708,874 + +0.0 3,708,875 - -0.4 3,708,968 - CA264_15890 0.31 -0.5 3,708,968 - CA264_15890 0.31 +0.2 3,708,968 - CA264_15890 0.31 -0.6 3,708,968 - CA264_15890 0.31 -0.1 3,709,005 + CA264_15890 0.43 -0.5 3,709,006 - CA264_15890 0.43 -0.0 3,709,020 - CA264_15890 0.48 -0.5 3,709,106 + CA264_15890 0.77 -0.7 3,709,106 + CA264_15890 0.77 -0.4 3,709,127 + CA264_15890 0.84 -0.9 3,709,128 - CA264_15890 0.85 +0.1 3,709,132 - CA264_15890 0.86 -0.3 3,709,179 - -0.2 3,709,533 + CA264_15895 0.13 -1.0 3,709,534 - CA264_15895 0.13 +0.6 3,709,653 + CA264_15895 0.24 -0.4 3,709,702 + CA264_15895 0.28 +1.7 3,709,834 - CA264_15895 0.39 -0.2 3,709,906 + CA264_15895 0.45 +0.4 3,709,907 - CA264_15895 0.45 -1.3 3,709,907 - CA264_15895 0.45 +0.6 3,709,907 - CA264_15895 0.45 -0.5 3,709,917 + CA264_15895 0.46 -1.0 3,709,917 + CA264_15895 0.46 +0.2 3,709,918 - CA264_15895 0.46 -0.2 3,709,951 - CA264_15895 0.49 -0.2 3,709,982 + CA264_15895 0.52 +0.6 3,709,997 + CA264_15895 0.53 +0.2 3,710,001 + CA264_15895 0.54 +1.8 3,710,028 - CA264_15895 0.56 -0.3 3,710,138 + CA264_15895 0.65 -0.3 3,710,150 + CA264_15895 0.66 +0.1
Or see this region's nucleotide sequence