Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14770

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14765 and CA264_14770 are separated by 289 nucleotidesCA264_14770 and CA264_14775 are separated by 130 nucleotidesCA264_14775 and CA264_14780 are separated by 7 nucleotides CA264_14765: CA264_14765 - hypothetical protein, at 3,468,886 to 3,470,547 _14765 CA264_14770: CA264_14770 - antibiotic ABC transporter ATP-binding protein, at 3,470,837 to 3,472,675 _14770 CA264_14775: CA264_14775 - hypothetical protein, at 3,472,806 to 3,473,147 _14775 CA264_14780: CA264_14780 - phosphoheptose isomerase, at 3,473,155 to 3,473,730 _14780 Position (kb) 3470 3471 3472 3473Strain fitness (log2 ratio) -2 -1 0 1at 3469.852 kb on + strand, within CA264_14765at 3469.860 kb on + strand, within CA264_14765at 3469.861 kb on - strand, within CA264_14765at 3469.861 kb on - strand, within CA264_14765at 3469.861 kb on - strand, within CA264_14765at 3469.862 kb on + strand, within CA264_14765at 3469.922 kb on + strand, within CA264_14765at 3469.923 kb on - strand, within CA264_14765at 3470.038 kb on + strand, within CA264_14765at 3470.101 kb on + strand, within CA264_14765at 3470.101 kb on + strand, within CA264_14765at 3470.108 kb on - strand, within CA264_14765at 3470.128 kb on - strand, within CA264_14765at 3470.135 kb on - strand, within CA264_14765at 3470.193 kb on - strand, within CA264_14765at 3470.193 kb on - strand, within CA264_14765at 3470.296 kb on + strand, within CA264_14765at 3470.321 kb on - strand, within CA264_14765at 3470.342 kb on - strand, within CA264_14765at 3470.482 kb on + strandat 3470.482 kb on + strandat 3470.483 kb on - strandat 3470.491 kb on + strandat 3470.492 kb on - strandat 3470.492 kb on - strandat 3470.492 kb on - strandat 3470.492 kb on - strandat 3470.558 kb on - strandat 3470.575 kb on - strandat 3470.676 kb on + strandat 3470.680 kb on + strandat 3470.681 kb on - strandat 3470.685 kb on - strandat 3470.729 kb on - strandat 3470.729 kb on - strandat 3470.730 kb on + strandat 3470.731 kb on - strandat 3470.831 kb on + strandat 3470.831 kb on + strandat 3472.694 kb on + strandat 3472.697 kb on + strandat 3472.704 kb on + strandat 3472.822 kb on + strandat 3472.822 kb on + strandat 3472.852 kb on + strand, within CA264_14775at 3472.859 kb on + strand, within CA264_14775at 3472.945 kb on + strand, within CA264_14775at 3472.951 kb on + strand, within CA264_14775at 3472.967 kb on + strand, within CA264_14775at 3472.970 kb on + strand, within CA264_14775at 3472.970 kb on + strand, within CA264_14775at 3473.001 kb on + strand, within CA264_14775at 3473.048 kb on - strand, within CA264_14775at 3473.167 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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3,469,852 + CA264_14765 0.58 -0.5
3,469,860 + CA264_14765 0.59 -0.4
3,469,861 - CA264_14765 0.59 +1.2
3,469,861 - CA264_14765 0.59 +0.3
3,469,861 - CA264_14765 0.59 +1.1
3,469,862 + CA264_14765 0.59 -0.5
3,469,922 + CA264_14765 0.62 -2.0
3,469,923 - CA264_14765 0.62 -0.7
3,470,038 + CA264_14765 0.69 -1.3
3,470,101 + CA264_14765 0.73 -0.3
3,470,101 + CA264_14765 0.73 +0.6
3,470,108 - CA264_14765 0.74 -0.4
3,470,128 - CA264_14765 0.75 -0.0
3,470,135 - CA264_14765 0.75 -0.7
3,470,193 - CA264_14765 0.79 -0.0
3,470,193 - CA264_14765 0.79 -2.2
3,470,296 + CA264_14765 0.85 -0.3
3,470,321 - CA264_14765 0.86 -0.2
3,470,342 - CA264_14765 0.88 -0.6
3,470,482 + -0.8
3,470,482 + +1.1
3,470,483 - -0.4
3,470,491 + -1.1
3,470,492 - -0.2
3,470,492 - -0.6
3,470,492 - -1.4
3,470,492 - +0.6
3,470,558 - -0.4
3,470,575 - -0.0
3,470,676 + +0.6
3,470,680 + +0.4
3,470,681 - -0.4
3,470,685 - +0.0
3,470,729 - +1.0
3,470,729 - +0.2
3,470,730 + -0.2
3,470,731 - -1.2
3,470,831 + -0.8
3,470,831 + +0.7
3,472,694 + +0.1
3,472,697 + -0.3
3,472,704 + -0.4
3,472,822 + -0.1
3,472,822 + -0.3
3,472,852 + CA264_14775 0.13 +0.1
3,472,859 + CA264_14775 0.15 +0.0
3,472,945 + CA264_14775 0.41 +0.2
3,472,951 + CA264_14775 0.42 -0.5
3,472,967 + CA264_14775 0.47 -0.4
3,472,970 + CA264_14775 0.48 -0.7
3,472,970 + CA264_14775 0.48 +1.3
3,473,001 + CA264_14775 0.57 +1.0
3,473,048 - CA264_14775 0.71 +1.2
3,473,167 - -0.3

Or see this region's nucleotide sequence