Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14700

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14690 and CA264_14695 are separated by 28 nucleotidesCA264_14695 and CA264_14700 are separated by 44 nucleotidesCA264_14700 and CA264_14705 are separated by 517 nucleotides CA264_14690: CA264_14690 - peptidase S41, at 3,453,538 to 3,455,187 _14690 CA264_14695: CA264_14695 - ribonuclease P protein component, at 3,455,216 to 3,455,626 _14695 CA264_14700: CA264_14700 - 50S ribosomal protein L34, at 3,455,671 to 3,455,832 _14700 CA264_14705: CA264_14705 - peptidase M61, at 3,456,350 to 3,458,065 _14705 Position (kb) 3455 3456Strain fitness (log2 ratio) -1 0 1at 3454.770 kb on + strand, within CA264_14690at 3454.770 kb on + strand, within CA264_14690at 3454.801 kb on + strand, within CA264_14690at 3454.893 kb on + strand, within CA264_14690at 3454.894 kb on - strand, within CA264_14690at 3454.901 kb on - strand, within CA264_14690at 3454.910 kb on + strand, within CA264_14690at 3454.961 kb on + strand, within CA264_14690at 3455.042 kb on + strandat 3455.043 kb on - strandat 3455.043 kb on - strandat 3455.043 kb on - strandat 3455.043 kb on - strandat 3455.045 kb on + strandat 3455.046 kb on - strandat 3455.046 kb on - strandat 3455.053 kb on + strandat 3455.054 kb on - strandat 3455.054 kb on - strandat 3455.054 kb on - strandat 3455.106 kb on - strandat 3455.184 kb on - strandat 3455.187 kb on + strandat 3455.188 kb on - strandat 3455.188 kb on - strandat 3455.191 kb on - strandat 3455.238 kb on - strandat 3455.238 kb on - strandat 3455.639 kb on - strandat 3456.010 kb on - strandat 3456.010 kb on - strandat 3456.014 kb on + strandat 3456.015 kb on - strandat 3456.073 kb on - strandat 3456.289 kb on + strandat 3456.289 kb on + strandat 3456.290 kb on - strandat 3456.291 kb on + strandat 3456.292 kb on - strandat 3456.292 kb on - strandat 3456.292 kb on - strandat 3456.292 kb on - strandat 3456.321 kb on - strandat 3456.328 kb on + strandat 3456.329 kb on - strandat 3456.345 kb on + strandat 3456.345 kb on + strandat 3456.349 kb on + strandat 3456.349 kb on + strandat 3456.350 kb on - strandat 3456.350 kb on - strandat 3456.356 kb on + strandat 3456.357 kb on - strandat 3456.357 kb on - strandat 3456.357 kb on - strandat 3456.357 kb on - strandat 3456.357 kb on - strandat 3456.359 kb on + strandat 3456.409 kb on + strandat 3456.474 kb on - strandat 3456.795 kb on + strand, within CA264_14705at 3456.796 kb on - strand, within CA264_14705

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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3,454,770 + CA264_14690 0.75 +0.2
3,454,770 + CA264_14690 0.75 +0.2
3,454,801 + CA264_14690 0.77 +1.0
3,454,893 + CA264_14690 0.82 +0.5
3,454,894 - CA264_14690 0.82 +0.0
3,454,901 - CA264_14690 0.83 +0.4
3,454,910 + CA264_14690 0.83 +0.2
3,454,961 + CA264_14690 0.86 +0.0
3,455,042 + +0.5
3,455,043 - -0.2
3,455,043 - +0.9
3,455,043 - -1.2
3,455,043 - -0.1
3,455,045 + -0.3
3,455,046 - -0.6
3,455,046 - -1.2
3,455,053 + +0.2
3,455,054 - -0.3
3,455,054 - +0.0
3,455,054 - +0.2
3,455,106 - +0.2
3,455,184 - -0.3
3,455,187 + +0.6
3,455,188 - +0.6
3,455,188 - +0.1
3,455,191 - +1.1
3,455,238 - +1.1
3,455,238 - -0.5
3,455,639 - +1.0
3,456,010 - -0.4
3,456,010 - +0.3
3,456,014 + -0.4
3,456,015 - -0.7
3,456,073 - +0.4
3,456,289 + +0.5
3,456,289 + +1.1
3,456,290 - -0.3
3,456,291 + +1.5
3,456,292 - +0.2
3,456,292 - +0.2
3,456,292 - -0.1
3,456,292 - +0.6
3,456,321 - +0.1
3,456,328 + +0.1
3,456,329 - -0.4
3,456,345 + -1.3
3,456,345 + -0.9
3,456,349 + -1.1
3,456,349 + -0.5
3,456,350 - -0.1
3,456,350 - +1.3
3,456,356 + -0.5
3,456,357 - +0.6
3,456,357 - -0.6
3,456,357 - +1.0
3,456,357 - -0.0
3,456,357 - +0.1
3,456,359 + -0.3
3,456,409 + -0.7
3,456,474 - +0.4
3,456,795 + CA264_14705 0.26 +0.3
3,456,796 - CA264_14705 0.26 +0.8

Or see this region's nucleotide sequence