Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14495

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14490 and CA264_14495 are separated by 18 nucleotidesCA264_14495 and CA264_14500 are separated by 157 nucleotides CA264_14490: CA264_14490 - polysaccharide biosynthesis protein, at 3,400,022 to 3,401,515 _14490 CA264_14495: CA264_14495 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 3,401,534 to 3,401,983 _14495 CA264_14500: CA264_14500 - nucleotidyltransferase, at 3,402,141 to 3,403,148 _14500 Position (kb) 3401 3402Strain fitness (log2 ratio) -3 -2 -1 0 1at 3401.516 kb on + strandat 3401.518 kb on + strandat 3401.522 kb on + strandat 3401.526 kb on + strandat 3401.530 kb on + strandat 3401.981 kb on + strandat 3402.026 kb on + strandat 3402.086 kb on + strandat 3402.122 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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3,401,516 + -1.2
3,401,518 + -0.9
3,401,522 + +0.5
3,401,526 + -0.4
3,401,530 + -0.4
3,401,981 + -2.8
3,402,026 + -0.6
3,402,086 + +0.1
3,402,122 + +0.2

Or see this region's nucleotide sequence