Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14450 and CA264_14455 are separated by 372 nucleotides CA264_14455 and CA264_14460 are separated by 7 nucleotides CA264_14460 and CA264_14465 are separated by 118 nucleotides
CA264_14450: CA264_14450 - endonuclease/exonuclease/phosphatase, at 3,390,169 to 3,391,302
_14450
CA264_14455: CA264_14455 - ribosome maturation factor, at 3,391,675 to 3,392,121
_14455
CA264_14460: CA264_14460 - transcription termination/antitermination protein NusA, at 3,392,129 to 3,393,382
_14460
CA264_14465: CA264_14465 - translation initiation factor IF-2, at 3,393,501 to 3,396,584
_14465
Position (kb)
3392
3393
3394 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3391.294 kb on - strand at 3391.321 kb on + strand at 3391.400 kb on + strand at 3391.400 kb on + strand at 3391.401 kb on - strand at 3391.401 kb on - strand at 3391.402 kb on + strand at 3391.403 kb on - strand at 3391.423 kb on + strand at 3391.423 kb on + strand at 3391.425 kb on + strand at 3391.429 kb on - strand at 3391.504 kb on + strand at 3391.505 kb on - strand at 3391.559 kb on + strand at 3391.627 kb on - strand at 3391.627 kb on - strand at 3391.633 kb on + strand at 3391.644 kb on + strand at 3391.710 kb on + strand at 3391.711 kb on - strand at 3391.711 kb on - strand at 3391.712 kb on + strand at 3391.712 kb on + strand at 3391.862 kb on - strand, within CA264_14455 at 3391.862 kb on - strand, within CA264_14455 at 3391.920 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.057 kb on - strand, within CA264_14455 at 3393.381 kb on - strand at 3393.441 kb on - strand at 3393.441 kb on - strand at 3393.443 kb on - strand at 3393.461 kb on + strand at 3393.464 kb on + strand at 3393.465 kb on - strand at 3393.476 kb on + strand at 3393.480 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,391,294 - -2.4 3,391,321 + -0.2 3,391,400 + +0.1 3,391,400 + +0.7 3,391,401 - -0.3 3,391,401 - +1.3 3,391,402 + +0.2 3,391,403 - -0.0 3,391,423 + -1.0 3,391,423 + +0.8 3,391,425 + -0.4 3,391,429 - +0.2 3,391,504 + +1.3 3,391,505 - -0.4 3,391,559 + +0.6 3,391,627 - -0.1 3,391,627 - -0.3 3,391,633 + +0.5 3,391,644 + +0.9 3,391,710 + +0.2 3,391,711 - +0.2 3,391,711 - -1.2 3,391,712 + +0.6 3,391,712 + +2.0 3,391,862 - CA264_14455 0.42 -0.2 3,391,862 - CA264_14455 0.42 +0.3 3,391,920 + CA264_14455 0.55 +1.2 3,392,056 + CA264_14455 0.85 +1.1 3,392,056 + CA264_14455 0.85 +1.8 3,392,056 + CA264_14455 0.85 +1.4 3,392,057 - CA264_14455 0.85 +0.8 3,393,381 - +0.3 3,393,441 - -0.6 3,393,441 - +0.7 3,393,443 - +0.1 3,393,461 + +0.7 3,393,464 + +1.2 3,393,465 - -1.1 3,393,476 + +0.3 3,393,480 + +0.8
Or see this region's nucleotide sequence