Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14340 and CA264_14345 are separated by 474 nucleotides CA264_14345 and CA264_14350 are separated by 201 nucleotides
CA264_14340: CA264_14340 - disulfide bond formation protein DsbD, at 3,367,188 to 3,369,377
_14340
CA264_14345: CA264_14345 - hypothetical protein, at 3,369,852 to 3,370,160
_14345
CA264_14350: CA264_14350 - hemolysin, at 3,370,362 to 3,371,675
_14350
Position (kb)
3369
3370
3371 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3369.348 kb on + strand at 3369.349 kb on - strand at 3369.357 kb on + strand at 3369.358 kb on - strand at 3369.379 kb on + strand at 3369.380 kb on - strand at 3369.384 kb on + strand at 3369.384 kb on + strand at 3369.385 kb on - strand at 3369.385 kb on - strand at 3369.385 kb on - strand at 3369.436 kb on - strand at 3369.464 kb on - strand at 3369.521 kb on - strand at 3369.549 kb on + strand at 3369.551 kb on + strand at 3369.551 kb on + strand at 3369.552 kb on - strand at 3369.552 kb on - strand at 3369.572 kb on - strand at 3369.653 kb on + strand at 3369.689 kb on + strand at 3369.691 kb on + strand at 3369.700 kb on + strand at 3369.757 kb on + strand at 3369.757 kb on + strand at 3369.758 kb on - strand at 3369.866 kb on - strand at 3369.915 kb on - strand, within CA264_14345 at 3369.976 kb on - strand, within CA264_14345 at 3369.976 kb on - strand, within CA264_14345 at 3369.996 kb on + strand, within CA264_14345 at 3369.996 kb on + strand, within CA264_14345 at 3369.997 kb on - strand, within CA264_14345 at 3369.998 kb on + strand, within CA264_14345 at 3370.002 kb on + strand, within CA264_14345 at 3370.003 kb on - strand, within CA264_14345 at 3370.218 kb on - strand at 3370.218 kb on - strand at 3370.238 kb on - strand at 3370.264 kb on + strand at 3370.270 kb on - strand at 3370.280 kb on + strand at 3370.280 kb on + strand at 3370.281 kb on - strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.288 kb on - strand at 3370.288 kb on - strand at 3370.308 kb on + strand at 3370.309 kb on - strand at 3370.438 kb on + strand at 3370.445 kb on - strand at 3370.460 kb on - strand at 3370.557 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.694 kb on + strand, within CA264_14350 at 3370.695 kb on - strand, within CA264_14350 at 3370.812 kb on - strand, within CA264_14350 at 3370.870 kb on + strand, within CA264_14350 at 3371.091 kb on - strand, within CA264_14350 at 3371.118 kb on + strand, within CA264_14350 at 3371.148 kb on - strand, within CA264_14350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,369,348 + -0.1 3,369,349 - -0.6 3,369,357 + +0.3 3,369,358 - -0.3 3,369,379 + -1.7 3,369,380 - +0.5 3,369,384 + +0.6 3,369,384 + +0.1 3,369,385 - +1.4 3,369,385 - -0.6 3,369,385 - +0.0 3,369,436 - +0.5 3,369,464 - +0.5 3,369,521 - +0.1 3,369,549 + -0.2 3,369,551 + +0.9 3,369,551 + +1.2 3,369,552 - +1.0 3,369,552 - +1.4 3,369,572 - +0.5 3,369,653 + +0.7 3,369,689 + -0.3 3,369,691 + +0.4 3,369,700 + +1.4 3,369,757 + -0.2 3,369,757 + +0.6 3,369,758 - +0.5 3,369,866 - -0.0 3,369,915 - CA264_14345 0.20 +0.1 3,369,976 - CA264_14345 0.40 +0.1 3,369,976 - CA264_14345 0.40 +0.6 3,369,996 + CA264_14345 0.47 +0.5 3,369,996 + CA264_14345 0.47 -1.7 3,369,997 - CA264_14345 0.47 +0.8 3,369,998 + CA264_14345 0.47 -0.4 3,370,002 + CA264_14345 0.49 +0.5 3,370,003 - CA264_14345 0.49 +2.1 3,370,218 - -0.4 3,370,218 - -1.6 3,370,238 - -3.5 3,370,264 + -3.4 3,370,270 - -3.4 3,370,280 + -4.0 3,370,280 + -3.5 3,370,281 - -4.5 3,370,287 + -2.4 3,370,287 + -3.5 3,370,287 + -3.8 3,370,287 + -3.8 3,370,288 - -3.3 3,370,288 - -4.0 3,370,308 + -4.1 3,370,309 - -2.3 3,370,438 + +1.9 3,370,445 - +2.1 3,370,460 - +2.0 3,370,557 - CA264_14350 0.15 +2.3 3,370,676 - CA264_14350 0.24 +1.8 3,370,676 - CA264_14350 0.24 +1.6 3,370,676 - CA264_14350 0.24 +1.8 3,370,694 + CA264_14350 0.25 +2.4 3,370,695 - CA264_14350 0.25 +3.7 3,370,812 - CA264_14350 0.34 +2.0 3,370,870 + CA264_14350 0.39 +2.1 3,371,091 - CA264_14350 0.55 +2.4 3,371,118 + CA264_14350 0.58 +2.2 3,371,148 - CA264_14350 0.60 +2.0
Or see this region's nucleotide sequence