Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14310

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14305 and CA264_14310 are separated by 118 nucleotidesCA264_14310 and CA264_14315 are separated by 189 nucleotidesCA264_14315 and CA264_14320 are separated by 175 nucleotides CA264_14305: CA264_14305 - hypothetical protein, at 3,357,075 to 3,360,707 _14305 CA264_14310: CA264_14310 - hypothetical protein, at 3,360,826 to 3,361,260 _14310 CA264_14315: CA264_14315 - hypothetical protein, at 3,361,450 to 3,362,004 _14315 CA264_14320: CA264_14320 - tRNA-specific adenosine deaminase, at 3,362,180 to 3,362,593 _14320 Position (kb) 3360 3361 3362Strain fitness (log2 ratio) -2 -1 0 1 2at 3359.908 kb on - strand, within CA264_14305at 3359.908 kb on - strand, within CA264_14305at 3360.036 kb on + strand, within CA264_14305at 3360.047 kb on + strand, within CA264_14305at 3360.085 kb on - strand, within CA264_14305at 3360.136 kb on + strand, within CA264_14305at 3360.151 kb on - strand, within CA264_14305at 3360.179 kb on - strand, within CA264_14305at 3360.183 kb on + strand, within CA264_14305at 3360.183 kb on + strand, within CA264_14305at 3360.183 kb on + strand, within CA264_14305at 3360.183 kb on + strand, within CA264_14305at 3360.184 kb on - strand, within CA264_14305at 3360.184 kb on - strand, within CA264_14305at 3360.184 kb on - strand, within CA264_14305at 3360.198 kb on + strand, within CA264_14305at 3360.251 kb on - strand, within CA264_14305at 3360.270 kb on + strand, within CA264_14305at 3360.270 kb on + strand, within CA264_14305at 3360.272 kb on + strand, within CA264_14305at 3360.273 kb on - strand, within CA264_14305at 3360.273 kb on - strand, within CA264_14305at 3360.290 kb on + strand, within CA264_14305at 3360.291 kb on - strand, within CA264_14305at 3360.298 kb on - strand, within CA264_14305at 3360.325 kb on + strand, within CA264_14305at 3360.345 kb on - strandat 3360.380 kb on + strandat 3360.419 kb on + strandat 3360.424 kb on + strandat 3360.432 kb on - strandat 3360.453 kb on + strandat 3360.562 kb on - strandat 3360.580 kb on + strandat 3360.610 kb on + strandat 3360.610 kb on + strandat 3360.648 kb on + strandat 3360.661 kb on + strandat 3360.683 kb on + strandat 3360.683 kb on + strandat 3360.683 kb on + strandat 3360.683 kb on + strandat 3360.683 kb on + strandat 3360.684 kb on - strandat 3360.727 kb on + strandat 3360.735 kb on + strandat 3360.735 kb on + strandat 3360.736 kb on - strandat 3360.751 kb on + strandat 3360.751 kb on + strandat 3360.752 kb on - strandat 3360.831 kb on + strandat 3360.952 kb on - strand, within CA264_14310at 3361.028 kb on + strand, within CA264_14310at 3361.028 kb on + strand, within CA264_14310at 3361.028 kb on + strand, within CA264_14310at 3361.029 kb on - strand, within CA264_14310at 3361.029 kb on - strand, within CA264_14310at 3361.029 kb on - strand, within CA264_14310at 3361.200 kb on - strand, within CA264_14310at 3361.247 kb on - strandat 3361.260 kb on + strandat 3361.260 kb on + strandat 3361.261 kb on - strandat 3361.263 kb on + strandat 3361.264 kb on - strandat 3361.298 kb on + strandat 3361.304 kb on + strandat 3361.304 kb on + strandat 3361.348 kb on + strandat 3361.445 kb on + strandat 3361.445 kb on + strandat 3361.446 kb on - strandat 3361.446 kb on - strandat 3361.467 kb on - strandat 3361.572 kb on + strand, within CA264_14315at 3361.572 kb on + strand, within CA264_14315at 3361.572 kb on + strand, within CA264_14315at 3361.659 kb on - strand, within CA264_14315at 3361.665 kb on + strand, within CA264_14315at 3361.767 kb on + strand, within CA264_14315at 3361.891 kb on + strand, within CA264_14315at 3361.891 kb on + strand, within CA264_14315at 3361.915 kb on + strand, within CA264_14315at 3361.924 kb on - strand, within CA264_14315at 3361.995 kb on + strandat 3361.999 kb on - strandat 3362.012 kb on + strandat 3362.012 kb on + strandat 3362.012 kb on + strandat 3362.016 kb on + strandat 3362.016 kb on + strandat 3362.017 kb on - strandat 3362.017 kb on - strandat 3362.017 kb on - strandat 3362.017 kb on - strandat 3362.020 kb on + strandat 3362.021 kb on - strandat 3362.021 kb on - strandat 3362.021 kb on - strandat 3362.024 kb on + strandat 3362.135 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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3,359,908 - CA264_14305 0.78 -0.8
3,359,908 - CA264_14305 0.78 -0.6
3,360,036 + CA264_14305 0.82 -0.4
3,360,047 + CA264_14305 0.82 -0.2
3,360,085 - CA264_14305 0.83 -1.3
3,360,136 + CA264_14305 0.84 +2.2
3,360,151 - CA264_14305 0.85 -1.2
3,360,179 - CA264_14305 0.85 -0.1
3,360,183 + CA264_14305 0.86 -0.2
3,360,183 + CA264_14305 0.86 +0.4
3,360,183 + CA264_14305 0.86 +0.3
3,360,183 + CA264_14305 0.86 -0.7
3,360,184 - CA264_14305 0.86 -0.2
3,360,184 - CA264_14305 0.86 -0.4
3,360,184 - CA264_14305 0.86 -0.1
3,360,198 + CA264_14305 0.86 -0.6
3,360,251 - CA264_14305 0.87 -1.5
3,360,270 + CA264_14305 0.88 -0.9
3,360,270 + CA264_14305 0.88 -1.8
3,360,272 + CA264_14305 0.88 -0.7
3,360,273 - CA264_14305 0.88 +1.4
3,360,273 - CA264_14305 0.88 +0.7
3,360,290 + CA264_14305 0.88 -1.0
3,360,291 - CA264_14305 0.89 -0.2
3,360,298 - CA264_14305 0.89 +0.6
3,360,325 + CA264_14305 0.89 -0.2
3,360,345 - -1.1
3,360,380 + -1.5
3,360,419 + +0.2
3,360,424 + -1.9
3,360,432 - -0.1
3,360,453 + -0.8
3,360,562 - +1.8
3,360,580 + -0.5
3,360,610 + -0.4
3,360,610 + -0.1
3,360,648 + -1.3
3,360,661 + +0.0
3,360,683 + -0.5
3,360,683 + -0.9
3,360,683 + -0.9
3,360,683 + -0.9
3,360,683 + -0.5
3,360,684 - -1.1
3,360,727 + +0.9
3,360,735 + -0.1
3,360,735 + -0.2
3,360,736 - +1.5
3,360,751 + -0.2
3,360,751 + -0.6
3,360,752 - -0.1
3,360,831 + -1.3
3,360,952 - CA264_14310 0.29 -0.3
3,361,028 + CA264_14310 0.46 -0.4
3,361,028 + CA264_14310 0.46 -1.0
3,361,028 + CA264_14310 0.46 -1.9
3,361,029 - CA264_14310 0.47 -1.0
3,361,029 - CA264_14310 0.47 -0.6
3,361,029 - CA264_14310 0.47 +0.1
3,361,200 - CA264_14310 0.86 -1.1
3,361,247 - -0.5
3,361,260 + -1.6
3,361,260 + -1.8
3,361,261 - -0.6
3,361,263 + -2.1
3,361,264 - -0.1
3,361,298 + -0.8
3,361,304 + -0.5
3,361,304 + -1.8
3,361,348 + -0.3
3,361,445 + -1.4
3,361,445 + -0.6
3,361,446 - -0.1
3,361,446 - -0.0
3,361,467 - -0.6
3,361,572 + CA264_14315 0.22 +0.4
3,361,572 + CA264_14315 0.22 -0.0
3,361,572 + CA264_14315 0.22 +0.9
3,361,659 - CA264_14315 0.38 -1.1
3,361,665 + CA264_14315 0.39 +0.3
3,361,767 + CA264_14315 0.57 -0.0
3,361,891 + CA264_14315 0.79 +0.2
3,361,891 + CA264_14315 0.79 +0.0
3,361,915 + CA264_14315 0.84 -1.0
3,361,924 - CA264_14315 0.85 -0.4
3,361,995 + -0.2
3,361,999 - +1.2
3,362,012 + +0.7
3,362,012 + -0.2
3,362,012 + +0.2
3,362,016 + +0.4
3,362,016 + +0.1
3,362,017 - +1.0
3,362,017 - +1.2
3,362,017 - +0.3
3,362,017 - +0.6
3,362,020 + +0.9
3,362,021 - +0.4
3,362,021 - +1.3
3,362,021 - +0.5
3,362,024 + +0.2
3,362,135 - +0.6

Or see this region's nucleotide sequence