Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13760 and CA264_13765 are separated by 366 nucleotides CA264_13765 and CA264_13770 are separated by 172 nucleotides
CA264_13760: CA264_13760 - succinate--CoA ligase subunit alpha, at 3,215,093 to 3,215,983
_13760
CA264_13765: CA264_13765 - DNA-binding transcriptional regulator OxyR, at 3,216,350 to 3,217,294
_13765
CA264_13770: CA264_13770 - DNA starvation/stationary phase protection protein, at 3,217,467 to 3,217,940
_13770
Position (kb)
3216
3217
3218 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3215.972 kb on - strand at 3215.982 kb on - strand at 3215.982 kb on - strand at 3215.982 kb on - strand at 3215.995 kb on - strand at 3215.995 kb on - strand at 3216.001 kb on + strand at 3216.053 kb on - strand at 3216.053 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.134 kb on + strand at 3216.192 kb on - strand at 3216.203 kb on - strand at 3216.206 kb on + strand at 3216.272 kb on + strand at 3216.272 kb on + strand at 3216.272 kb on + strand at 3216.281 kb on + strand at 3216.281 kb on + strand at 3216.288 kb on + strand at 3216.411 kb on - strand at 3216.412 kb on + strand at 3216.622 kb on + strand, within CA264_13765 at 3216.622 kb on + strand, within CA264_13765 at 3216.752 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.810 kb on + strand, within CA264_13765 at 3216.896 kb on + strand, within CA264_13765 at 3217.100 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.103 kb on - strand, within CA264_13765 at 3217.103 kb on - strand, within CA264_13765 at 3217.160 kb on + strand, within CA264_13765 at 3217.161 kb on - strand, within CA264_13765 at 3217.268 kb on + strand at 3217.272 kb on + strand at 3217.272 kb on + strand at 3217.277 kb on + strand at 3217.277 kb on + strand at 3217.284 kb on - strand at 3217.303 kb on - strand at 3217.306 kb on - strand at 3217.309 kb on + strand at 3217.349 kb on - strand at 3217.349 kb on - strand at 3217.455 kb on - strand at 3217.493 kb on - strand at 3217.549 kb on - strand, within CA264_13770 at 3217.558 kb on - strand, within CA264_13770 at 3217.561 kb on - strand, within CA264_13770 at 3217.622 kb on + strand, within CA264_13770 at 3217.722 kb on + strand, within CA264_13770 at 3217.725 kb on - strand, within CA264_13770 at 3217.725 kb on - strand, within CA264_13770 at 3217.933 kb on + strand at 3217.934 kb on - strand at 3217.938 kb on + strand at 3217.938 kb on + strand at 3217.939 kb on - strand at 3218.032 kb on - strand at 3218.057 kb on - strand at 3218.057 kb on - strand at 3218.057 kb on - strand at 3218.060 kb on + strand at 3218.060 kb on + strand at 3218.061 kb on - strand at 3218.061 kb on - strand at 3218.062 kb on + strand at 3218.067 kb on + strand at 3218.068 kb on - strand at 3218.078 kb on + strand at 3218.078 kb on + strand at 3218.082 kb on + strand at 3218.102 kb on + strand at 3218.136 kb on + strand at 3218.189 kb on - strand at 3218.197 kb on - strand at 3218.248 kb on - strand at 3218.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,215,972 - +1.3 3,215,982 - -0.6 3,215,982 - +0.5 3,215,982 - +0.8 3,215,995 - -0.5 3,215,995 - +1.6 3,216,001 + +0.3 3,216,053 - +0.8 3,216,053 - +0.1 3,216,131 - +1.4 3,216,131 - -1.1 3,216,131 - +0.7 3,216,131 - -0.7 3,216,131 - -0.1 3,216,131 - +1.0 3,216,134 + +1.1 3,216,192 - -0.1 3,216,203 - -0.5 3,216,206 + -0.7 3,216,272 + +0.7 3,216,272 + -0.3 3,216,272 + -0.4 3,216,281 + -0.2 3,216,281 + +0.9 3,216,288 + +0.2 3,216,411 - -0.2 3,216,412 + -0.4 3,216,622 + CA264_13765 0.29 -0.2 3,216,622 + CA264_13765 0.29 +1.4 3,216,752 + CA264_13765 0.43 +1.0 3,216,792 + CA264_13765 0.47 -0.8 3,216,792 + CA264_13765 0.47 +0.1 3,216,792 + CA264_13765 0.47 -0.6 3,216,810 + CA264_13765 0.49 -0.4 3,216,896 + CA264_13765 0.58 -1.0 3,217,100 + CA264_13765 0.79 +0.6 3,217,102 + CA264_13765 0.80 -0.8 3,217,102 + CA264_13765 0.80 -0.3 3,217,102 + CA264_13765 0.80 -0.4 3,217,102 + CA264_13765 0.80 -1.1 3,217,103 - CA264_13765 0.80 +0.7 3,217,103 - CA264_13765 0.80 +1.7 3,217,160 + CA264_13765 0.86 -0.7 3,217,161 - CA264_13765 0.86 -0.3 3,217,268 + +0.2 3,217,272 + -0.5 3,217,272 + -0.3 3,217,277 + -0.4 3,217,277 + -0.9 3,217,284 - -1.0 3,217,303 - -1.2 3,217,306 - -1.5 3,217,309 + -0.4 3,217,349 - -0.1 3,217,349 - -0.4 3,217,455 - -0.4 3,217,493 - -0.3 3,217,549 - CA264_13770 0.17 -1.5 3,217,558 - CA264_13770 0.19 -1.3 3,217,561 - CA264_13770 0.20 -1.0 3,217,622 + CA264_13770 0.33 -0.5 3,217,722 + CA264_13770 0.54 -0.8 3,217,725 - CA264_13770 0.54 +0.1 3,217,725 - CA264_13770 0.54 -2.5 3,217,933 + -1.0 3,217,934 - -1.3 3,217,938 + -0.7 3,217,938 + -1.2 3,217,939 - -1.5 3,218,032 - -1.9 3,218,057 - -1.8 3,218,057 - -1.2 3,218,057 - -1.0 3,218,060 + -0.2 3,218,060 + -1.0 3,218,061 - -2.0 3,218,061 - -1.1 3,218,062 + -0.2 3,218,067 + -0.7 3,218,068 - -1.0 3,218,078 + -0.2 3,218,078 + +0.6 3,218,082 + -0.1 3,218,102 + +1.8 3,218,136 + +0.4 3,218,189 - -1.8 3,218,197 - -1.5 3,218,248 - -0.8 3,218,293 - -1.1
Or see this region's nucleotide sequence