Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13700 and CA264_13705 are separated by 1 nucleotides CA264_13705 and CA264_13710 are separated by 8 nucleotides CA264_13710 and CA264_13715 are separated by 132 nucleotides
CA264_13700: CA264_13700 - succinylglutamate desuccinylase, at 3,203,345 to 3,204,286
_13700
CA264_13705: CA264_13705 - 30S ribosomal protein S6--L-glutamate ligase, at 3,204,288 to 3,205,193
_13705
CA264_13710: CA264_13710 - ATP-dependent zinc protease, at 3,205,202 to 3,205,684
_13710
CA264_13715: CA264_13715 - sorbosone dehydrogenase, at 3,205,817 to 3,207,022
_13715
Position (kb)
3205
3206 Strain fitness (log2 ratio)
-1
0
1 at 3204.253 kb on + strand at 3204.254 kb on - strand at 3204.259 kb on + strand at 3204.290 kb on - strand at 3204.309 kb on - strand at 3204.340 kb on + strand at 3204.345 kb on + strand at 3204.346 kb on - strand at 3204.346 kb on - strand at 3204.347 kb on + strand at 3204.354 kb on - strand at 3204.412 kb on - strand, within CA264_13705 at 3204.600 kb on + strand, within CA264_13705 at 3204.600 kb on + strand, within CA264_13705 at 3204.829 kb on + strand, within CA264_13705 at 3204.876 kb on + strand, within CA264_13705 at 3204.877 kb on - strand, within CA264_13705 at 3204.896 kb on + strand, within CA264_13705 at 3204.909 kb on + strand, within CA264_13705 at 3204.979 kb on + strand, within CA264_13705 at 3204.986 kb on + strand, within CA264_13705 at 3205.046 kb on - strand, within CA264_13705 at 3205.104 kb on + strand at 3205.182 kb on - strand at 3205.182 kb on - strand at 3205.225 kb on + strand at 3205.226 kb on - strand at 3205.227 kb on + strand at 3205.228 kb on - strand at 3205.228 kb on - strand at 3205.561 kb on + strand, within CA264_13710 at 3205.699 kb on - strand at 3205.703 kb on + strand at 3205.704 kb on - strand at 3205.706 kb on + strand at 3205.748 kb on + strand at 3205.819 kb on - strand at 3205.827 kb on + strand at 3205.828 kb on - strand at 3205.855 kb on + strand at 3205.957 kb on - strand, within CA264_13715 at 3206.053 kb on + strand, within CA264_13715 at 3206.081 kb on - strand, within CA264_13715 at 3206.282 kb on - strand, within CA264_13715 at 3206.304 kb on + strand, within CA264_13715 at 3206.463 kb on + strand, within CA264_13715 at 3206.464 kb on - strand, within CA264_13715 at 3206.493 kb on + strand, within CA264_13715 at 3206.545 kb on - strand, within CA264_13715 at 3206.574 kb on - strand, within CA264_13715 at 3206.613 kb on + strand, within CA264_13715 at 3206.614 kb on - strand, within CA264_13715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,204,253 + -0.9 3,204,254 - -1.0 3,204,259 + +0.7 3,204,290 - -0.0 3,204,309 - -0.2 3,204,340 + +0.2 3,204,345 + +0.6 3,204,346 - +1.0 3,204,346 - +0.3 3,204,347 + -0.2 3,204,354 - +0.0 3,204,412 - CA264_13705 0.14 +0.7 3,204,600 + CA264_13705 0.34 -0.2 3,204,600 + CA264_13705 0.34 -0.1 3,204,829 + CA264_13705 0.60 +0.6 3,204,876 + CA264_13705 0.65 -0.1 3,204,877 - CA264_13705 0.65 +0.5 3,204,896 + CA264_13705 0.67 +0.8 3,204,909 + CA264_13705 0.69 -0.4 3,204,979 + CA264_13705 0.76 -0.6 3,204,986 + CA264_13705 0.77 -0.3 3,205,046 - CA264_13705 0.84 +0.6 3,205,104 + +0.2 3,205,182 - -1.0 3,205,182 - -0.2 3,205,225 + -0.1 3,205,226 - +1.3 3,205,227 + -0.4 3,205,228 - +0.5 3,205,228 - -0.5 3,205,561 + CA264_13710 0.74 +0.3 3,205,699 - -0.0 3,205,703 + +0.4 3,205,704 - -0.6 3,205,706 + +0.4 3,205,748 + -0.1 3,205,819 - +0.0 3,205,827 + -0.0 3,205,828 - +0.5 3,205,855 + +0.5 3,205,957 - CA264_13715 0.12 -0.1 3,206,053 + CA264_13715 0.20 +0.1 3,206,081 - CA264_13715 0.22 -0.9 3,206,282 - CA264_13715 0.39 +0.6 3,206,304 + CA264_13715 0.40 -0.1 3,206,463 + CA264_13715 0.54 +0.3 3,206,464 - CA264_13715 0.54 +0.1 3,206,493 + CA264_13715 0.56 +0.2 3,206,545 - CA264_13715 0.60 +0.1 3,206,574 - CA264_13715 0.63 -0.4 3,206,613 + CA264_13715 0.66 -0.0 3,206,614 - CA264_13715 0.66 +0.1
Or see this region's nucleotide sequence