Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10570 and CA264_10575 are separated by 77 nucleotides CA264_10575 and CA264_10580 are separated by 15 nucleotides CA264_10580 and CA264_10585 are separated by 306 nucleotides CA264_10585 and CA264_10590 are separated by 227 nucleotides
CA264_10570: CA264_10570 - hypothetical protein, at 2,449,507 to 2,449,914
_10570
CA264_10575: CA264_10575 - hypothetical protein, at 2,449,992 to 2,450,768
_10575
CA264_10580: CA264_10580 - hypothetical protein, at 2,450,784 to 2,451,182
_10580
CA264_10585: CA264_10585 - hypothetical protein, at 2,451,489 to 2,451,698
_10585
CA264_10590: CA264_10590 - hypothetical protein, at 2,451,926 to 2,452,801
_10590
Position (kb)
2450
2451
2452 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2449.791 kb on + strand, within CA264_10570 at 2449.833 kb on + strand, within CA264_10570 at 2449.833 kb on + strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.838 kb on - strand, within CA264_10570 at 2449.838 kb on - strand, within CA264_10570 at 2449.847 kb on - strand, within CA264_10570 at 2449.940 kb on + strand at 2449.946 kb on - strand at 2449.997 kb on - strand at 2449.997 kb on - strand at 2449.997 kb on - strand at 2449.999 kb on - strand at 2449.999 kb on - strand at 2450.044 kb on + strand at 2450.242 kb on - strand, within CA264_10575 at 2450.339 kb on + strand, within CA264_10575 at 2450.595 kb on + strand, within CA264_10575 at 2450.596 kb on - strand, within CA264_10575 at 2450.756 kb on - strand at 2450.940 kb on - strand, within CA264_10580 at 2450.966 kb on + strand, within CA264_10580 at 2451.044 kb on + strand, within CA264_10580 at 2451.138 kb on - strand, within CA264_10580 at 2451.168 kb on + strand at 2451.196 kb on - strand at 2451.199 kb on + strand at 2451.199 kb on + strand at 2451.200 kb on - strand at 2451.278 kb on + strand at 2451.279 kb on - strand at 2451.438 kb on + strand at 2451.438 kb on + strand at 2451.439 kb on - strand at 2451.491 kb on - strand at 2451.522 kb on + strand, within CA264_10585 at 2451.534 kb on + strand, within CA264_10585 at 2451.535 kb on - strand, within CA264_10585 at 2451.643 kb on - strand, within CA264_10585 at 2451.688 kb on - strand at 2451.688 kb on - strand at 2451.822 kb on + strand at 2451.823 kb on - strand at 2451.823 kb on - strand at 2451.860 kb on + strand at 2451.861 kb on - strand at 2451.861 kb on - strand at 2451.861 kb on - strand at 2451.869 kb on + strand at 2451.902 kb on + strand at 2451.903 kb on - strand at 2451.903 kb on - strand at 2451.918 kb on + strand at 2451.924 kb on + strand at 2451.945 kb on + strand at 2451.945 kb on + strand at 2451.945 kb on + strand at 2451.946 kb on - strand at 2451.947 kb on + strand at 2451.947 kb on + strand at 2451.947 kb on + strand at 2451.948 kb on - strand at 2451.955 kb on - strand at 2452.002 kb on + strand at 2452.014 kb on + strand, within CA264_10590 at 2452.015 kb on - strand, within CA264_10590 at 2452.015 kb on - strand, within CA264_10590 at 2452.018 kb on + strand, within CA264_10590 at 2452.019 kb on - strand, within CA264_10590 at 2452.019 kb on - strand, within CA264_10590 at 2452.019 kb on - strand, within CA264_10590 at 2452.019 kb on - strand, within CA264_10590 at 2452.036 kb on - strand, within CA264_10590 at 2452.036 kb on - strand, within CA264_10590 at 2452.079 kb on + strand, within CA264_10590 at 2452.094 kb on - strand, within CA264_10590 at 2452.125 kb on + strand, within CA264_10590 at 2452.125 kb on + strand, within CA264_10590 at 2452.125 kb on + strand, within CA264_10590 at 2452.126 kb on - strand, within CA264_10590 at 2452.127 kb on + strand, within CA264_10590 at 2452.127 kb on + strand, within CA264_10590 at 2452.128 kb on - strand, within CA264_10590 at 2452.128 kb on - strand, within CA264_10590 at 2452.129 kb on + strand, within CA264_10590 at 2452.163 kb on - strand, within CA264_10590 at 2452.171 kb on + strand, within CA264_10590
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,449,791 + CA264_10570 0.70 +0.4 2,449,833 + CA264_10570 0.80 -0.4 2,449,833 + CA264_10570 0.80 +0.3 2,449,834 - CA264_10570 0.80 -1.4 2,449,834 - CA264_10570 0.80 +0.6 2,449,834 - CA264_10570 0.80 -0.2 2,449,834 - CA264_10570 0.80 -0.1 2,449,838 - CA264_10570 0.81 +0.0 2,449,838 - CA264_10570 0.81 -1.1 2,449,847 - CA264_10570 0.83 -0.1 2,449,940 + -0.4 2,449,946 - -2.0 2,449,997 - -0.3 2,449,997 - +0.0 2,449,997 - +0.1 2,449,999 - -0.4 2,449,999 - +0.6 2,450,044 + +0.8 2,450,242 - CA264_10575 0.32 -1.0 2,450,339 + CA264_10575 0.45 -0.6 2,450,595 + CA264_10575 0.78 +0.4 2,450,596 - CA264_10575 0.78 -1.1 2,450,756 - -0.3 2,450,940 - CA264_10580 0.39 +0.3 2,450,966 + CA264_10580 0.46 -0.3 2,451,044 + CA264_10580 0.65 -1.3 2,451,138 - CA264_10580 0.89 -0.9 2,451,168 + -0.1 2,451,196 - +0.6 2,451,199 + -0.5 2,451,199 + +2.2 2,451,200 - +0.0 2,451,278 + -1.3 2,451,279 - -0.3 2,451,438 + -0.0 2,451,438 + +0.8 2,451,439 - +0.2 2,451,491 - -0.1 2,451,522 + CA264_10585 0.16 +0.1 2,451,534 + CA264_10585 0.21 +0.2 2,451,535 - CA264_10585 0.22 +0.1 2,451,643 - CA264_10585 0.73 +0.9 2,451,688 - -0.0 2,451,688 - -0.1 2,451,822 + -0.1 2,451,823 - +0.4 2,451,823 - +0.1 2,451,860 + -0.5 2,451,861 - +1.7 2,451,861 - -0.3 2,451,861 - +1.2 2,451,869 + -0.6 2,451,902 + +0.5 2,451,903 - +0.2 2,451,903 - +0.0 2,451,918 + -0.3 2,451,924 + -0.1 2,451,945 + +0.0 2,451,945 + +0.3 2,451,945 + +0.3 2,451,946 - +0.1 2,451,947 + -0.3 2,451,947 + +0.3 2,451,947 + +0.0 2,451,948 - -0.9 2,451,955 - -0.7 2,452,002 + +0.6 2,452,014 + CA264_10590 0.10 +0.8 2,452,015 - CA264_10590 0.10 +2.4 2,452,015 - CA264_10590 0.10 -0.1 2,452,018 + CA264_10590 0.11 +0.6 2,452,019 - CA264_10590 0.11 -0.6 2,452,019 - CA264_10590 0.11 -1.6 2,452,019 - CA264_10590 0.11 +0.3 2,452,019 - CA264_10590 0.11 -0.4 2,452,036 - CA264_10590 0.13 +0.4 2,452,036 - CA264_10590 0.13 +0.3 2,452,079 + CA264_10590 0.17 -1.4 2,452,094 - CA264_10590 0.19 -0.1 2,452,125 + CA264_10590 0.23 -2.1 2,452,125 + CA264_10590 0.23 +0.1 2,452,125 + CA264_10590 0.23 -0.0 2,452,126 - CA264_10590 0.23 -0.4 2,452,127 + CA264_10590 0.23 +0.2 2,452,127 + CA264_10590 0.23 +0.4 2,452,128 - CA264_10590 0.23 -0.5 2,452,128 - CA264_10590 0.23 +0.7 2,452,129 + CA264_10590 0.23 -0.4 2,452,163 - CA264_10590 0.27 -0.1 2,452,171 + CA264_10590 0.28 +0.7
Or see this region's nucleotide sequence