Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09620 and CA264_09625 are separated by 286 nucleotides CA264_09625 and CA264_09630 are separated by 146 nucleotides CA264_09630 and CA264_09635 are separated by 118 nucleotides CA264_09635 and CA264_09640 are separated by 98 nucleotides
CA264_09620: CA264_09620 - hypothetical protein, at 2,243,063 to 2,243,398
_09620
CA264_09625: CA264_09625 - hypothetical protein, at 2,243,685 to 2,244,100
_09625
CA264_09630: CA264_09630 - hypothetical protein, at 2,244,247 to 2,244,885
_09630
CA264_09635: CA264_09635 - hypothetical protein, at 2,245,004 to 2,245,669
_09635
CA264_09640: CA264_09640 - hypothetical protein, at 2,245,768 to 2,246,403
_09640
Position (kb)
2244
2245 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2243.256 kb on + strand, within CA264_09620 at 2243.257 kb on - strand, within CA264_09620 at 2243.257 kb on - strand, within CA264_09620 at 2243.261 kb on - strand, within CA264_09620 at 2243.304 kb on - strand, within CA264_09620 at 2243.313 kb on - strand, within CA264_09620 at 2243.340 kb on + strand, within CA264_09620 at 2243.349 kb on + strand, within CA264_09620 at 2243.373 kb on + strand at 2243.373 kb on + strand at 2243.374 kb on - strand at 2243.400 kb on - strand at 2243.468 kb on + strand at 2243.469 kb on - strand at 2243.469 kb on - strand at 2243.485 kb on + strand at 2243.485 kb on + strand at 2243.489 kb on - strand at 2243.489 kb on - strand at 2243.489 kb on - strand at 2243.490 kb on + strand at 2243.490 kb on + strand at 2243.494 kb on - strand at 2243.494 kb on - strand at 2243.537 kb on - strand at 2243.776 kb on - strand, within CA264_09625 at 2243.785 kb on + strand, within CA264_09625 at 2243.863 kb on + strand, within CA264_09625 at 2243.873 kb on + strand, within CA264_09625 at 2243.874 kb on - strand, within CA264_09625 at 2243.874 kb on - strand, within CA264_09625 at 2243.922 kb on - strand, within CA264_09625 at 2243.922 kb on - strand, within CA264_09625 at 2243.922 kb on - strand, within CA264_09625 at 2244.010 kb on - strand, within CA264_09625 at 2244.010 kb on - strand, within CA264_09625 at 2244.012 kb on + strand, within CA264_09625 at 2244.012 kb on + strand, within CA264_09625 at 2244.048 kb on - strand, within CA264_09625 at 2244.048 kb on - strand, within CA264_09625 at 2244.048 kb on - strand, within CA264_09625 at 2244.080 kb on - strand at 2244.081 kb on + strand at 2244.148 kb on - strand at 2244.157 kb on + strand at 2244.187 kb on + strand at 2244.188 kb on - strand at 2244.188 kb on - strand at 2244.188 kb on - strand at 2244.188 kb on - strand at 2244.188 kb on - strand at 2244.189 kb on + strand at 2244.190 kb on - strand at 2244.190 kb on - strand at 2244.192 kb on + strand at 2244.193 kb on - strand at 2244.212 kb on + strand at 2244.249 kb on - strand at 2244.285 kb on + strand at 2244.305 kb on - strand at 2244.305 kb on - strand at 2244.360 kb on + strand, within CA264_09630 at 2244.367 kb on - strand, within CA264_09630 at 2244.368 kb on - strand, within CA264_09630 at 2244.425 kb on + strand, within CA264_09630 at 2244.463 kb on + strand, within CA264_09630 at 2244.464 kb on - strand, within CA264_09630 at 2244.508 kb on - strand, within CA264_09630 at 2244.547 kb on + strand, within CA264_09630 at 2244.548 kb on - strand, within CA264_09630 at 2244.551 kb on - strand, within CA264_09630 at 2244.553 kb on + strand, within CA264_09630 at 2244.567 kb on + strand, within CA264_09630 at 2244.589 kb on - strand, within CA264_09630 at 2244.590 kb on + strand, within CA264_09630 at 2244.591 kb on - strand, within CA264_09630 at 2244.608 kb on + strand, within CA264_09630 at 2244.609 kb on - strand, within CA264_09630 at 2244.609 kb on - strand, within CA264_09630 at 2244.609 kb on - strand, within CA264_09630 at 2244.623 kb on + strand, within CA264_09630 at 2244.638 kb on - strand, within CA264_09630 at 2244.659 kb on - strand, within CA264_09630 at 2244.665 kb on + strand, within CA264_09630 at 2244.665 kb on + strand, within CA264_09630 at 2244.666 kb on - strand, within CA264_09630 at 2244.666 kb on - strand, within CA264_09630 at 2244.666 kb on - strand, within CA264_09630 at 2244.666 kb on - strand, within CA264_09630 at 2244.666 kb on - strand, within CA264_09630 at 2244.709 kb on - strand, within CA264_09630 at 2244.761 kb on + strand, within CA264_09630 at 2244.770 kb on + strand, within CA264_09630 at 2244.783 kb on + strand, within CA264_09630 at 2244.792 kb on - strand, within CA264_09630 at 2244.796 kb on + strand, within CA264_09630 at 2244.835 kb on + strand at 2244.836 kb on - strand at 2244.850 kb on + strand at 2244.856 kb on + strand at 2244.856 kb on + strand at 2244.856 kb on + strand at 2244.863 kb on - strand at 2244.892 kb on + strand at 2244.892 kb on + strand at 2244.892 kb on + strand at 2244.979 kb on + strand at 2244.980 kb on - strand at 2244.980 kb on - strand at 2244.985 kb on + strand at 2245.003 kb on - strand at 2245.005 kb on + strand at 2245.038 kb on - strand at 2245.089 kb on + strand, within CA264_09635 at 2245.149 kb on - strand, within CA264_09635 at 2245.185 kb on - strand, within CA264_09635 at 2245.203 kb on + strand, within CA264_09635 at 2245.284 kb on + strand, within CA264_09635 at 2245.320 kb on - strand, within CA264_09635 at 2245.330 kb on + strand, within CA264_09635 at 2245.342 kb on + strand, within CA264_09635 at 2245.382 kb on + strand, within CA264_09635 at 2245.530 kb on - strand, within CA264_09635 at 2245.530 kb on - strand, within CA264_09635 at 2245.558 kb on + strand, within CA264_09635 at 2245.591 kb on + strand, within CA264_09635 at 2245.596 kb on - strand, within CA264_09635 at 2245.655 kb on - strand at 2245.698 kb on + strand at 2245.699 kb on - strand at 2245.717 kb on + strand at 2245.718 kb on - strand at 2245.745 kb on - strand at 2245.745 kb on - strand at 2245.756 kb on - strand at 2245.756 kb on - strand at 2245.763 kb on + strand at 2245.770 kb on - strand at 2245.770 kb on - strand at 2245.841 kb on + strand, within CA264_09640 at 2245.841 kb on + strand, within CA264_09640 at 2245.841 kb on + strand, within CA264_09640 at 2245.842 kb on - strand, within CA264_09640
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,243,256 + CA264_09620 0.57 -0.6 2,243,257 - CA264_09620 0.58 +0.7 2,243,257 - CA264_09620 0.58 -0.3 2,243,261 - CA264_09620 0.59 +0.2 2,243,304 - CA264_09620 0.72 +0.3 2,243,313 - CA264_09620 0.74 -0.4 2,243,340 + CA264_09620 0.82 -0.7 2,243,349 + CA264_09620 0.85 -0.1 2,243,373 + +0.3 2,243,373 + -0.5 2,243,374 - -0.6 2,243,400 - +0.3 2,243,468 + -0.0 2,243,469 - +0.0 2,243,469 - -0.4 2,243,485 + -1.1 2,243,485 + -1.4 2,243,489 - +0.2 2,243,489 - -2.2 2,243,489 - +0.7 2,243,490 + -0.2 2,243,490 + +0.2 2,243,494 - +0.3 2,243,494 - -1.2 2,243,537 - -0.1 2,243,776 - CA264_09625 0.22 +0.4 2,243,785 + CA264_09625 0.24 +0.1 2,243,863 + CA264_09625 0.43 -0.7 2,243,873 + CA264_09625 0.45 +0.4 2,243,874 - CA264_09625 0.45 +0.7 2,243,874 - CA264_09625 0.45 -0.9 2,243,922 - CA264_09625 0.57 -0.2 2,243,922 - CA264_09625 0.57 +0.0 2,243,922 - CA264_09625 0.57 -0.9 2,244,010 - CA264_09625 0.78 -0.7 2,244,010 - CA264_09625 0.78 +0.4 2,244,012 + CA264_09625 0.79 -0.6 2,244,012 + CA264_09625 0.79 -1.4 2,244,048 - CA264_09625 0.87 -0.2 2,244,048 - CA264_09625 0.87 -0.6 2,244,048 - CA264_09625 0.87 -0.5 2,244,080 - -0.0 2,244,081 + -0.8 2,244,148 - -0.4 2,244,157 + +0.2 2,244,187 + -1.3 2,244,188 - -1.2 2,244,188 - +0.5 2,244,188 - +0.0 2,244,188 - -0.5 2,244,188 - -0.5 2,244,189 + -0.8 2,244,190 - -0.4 2,244,190 - +1.7 2,244,192 + +0.4 2,244,193 - -0.5 2,244,212 + -0.1 2,244,249 - -1.1 2,244,285 + -1.8 2,244,305 - -0.7 2,244,305 - +0.2 2,244,360 + CA264_09630 0.18 -0.8 2,244,367 - CA264_09630 0.19 -0.2 2,244,368 - CA264_09630 0.19 -0.1 2,244,425 + CA264_09630 0.28 -0.3 2,244,463 + CA264_09630 0.34 -0.7 2,244,464 - CA264_09630 0.34 -0.2 2,244,508 - CA264_09630 0.41 +0.8 2,244,547 + CA264_09630 0.47 -0.5 2,244,548 - CA264_09630 0.47 +0.2 2,244,551 - CA264_09630 0.48 -2.4 2,244,553 + CA264_09630 0.48 +0.2 2,244,567 + CA264_09630 0.50 -0.1 2,244,589 - CA264_09630 0.54 +1.2 2,244,590 + CA264_09630 0.54 -0.5 2,244,591 - CA264_09630 0.54 +1.8 2,244,608 + CA264_09630 0.56 -1.1 2,244,609 - CA264_09630 0.57 -0.6 2,244,609 - CA264_09630 0.57 +0.4 2,244,609 - CA264_09630 0.57 -0.1 2,244,623 + CA264_09630 0.59 -0.6 2,244,638 - CA264_09630 0.61 -0.3 2,244,659 - CA264_09630 0.64 -0.2 2,244,665 + CA264_09630 0.65 -0.5 2,244,665 + CA264_09630 0.65 -0.1 2,244,666 - CA264_09630 0.66 -1.0 2,244,666 - CA264_09630 0.66 +0.4 2,244,666 - CA264_09630 0.66 -0.4 2,244,666 - CA264_09630 0.66 -0.5 2,244,666 - CA264_09630 0.66 -1.0 2,244,709 - CA264_09630 0.72 +1.1 2,244,761 + CA264_09630 0.80 +0.1 2,244,770 + CA264_09630 0.82 -1.1 2,244,783 + CA264_09630 0.84 -0.1 2,244,792 - CA264_09630 0.85 -0.9 2,244,796 + CA264_09630 0.86 +2.9 2,244,835 + -0.5 2,244,836 - -0.6 2,244,850 + -0.6 2,244,856 + -1.0 2,244,856 + +0.2 2,244,856 + -0.3 2,244,863 - -0.2 2,244,892 + -0.9 2,244,892 + -0.4 2,244,892 + -0.4 2,244,979 + -0.0 2,244,980 - -0.3 2,244,980 - -0.9 2,244,985 + +0.6 2,245,003 - -0.8 2,245,005 + -0.2 2,245,038 - -1.3 2,245,089 + CA264_09635 0.13 +1.9 2,245,149 - CA264_09635 0.22 -1.5 2,245,185 - CA264_09635 0.27 -0.4 2,245,203 + CA264_09635 0.30 -1.3 2,245,284 + CA264_09635 0.42 +0.2 2,245,320 - CA264_09635 0.47 -0.7 2,245,330 + CA264_09635 0.49 -1.0 2,245,342 + CA264_09635 0.51 +0.9 2,245,382 + CA264_09635 0.57 -2.1 2,245,530 - CA264_09635 0.79 -0.1 2,245,530 - CA264_09635 0.79 +0.5 2,245,558 + CA264_09635 0.83 -0.6 2,245,591 + CA264_09635 0.88 -0.5 2,245,596 - CA264_09635 0.89 -0.3 2,245,655 - -1.2 2,245,698 + +0.2 2,245,699 - -0.4 2,245,717 + +0.7 2,245,718 - -1.0 2,245,745 - -1.1 2,245,745 - -1.3 2,245,756 - -0.8 2,245,756 - -0.4 2,245,763 + -0.5 2,245,770 - -0.5 2,245,770 - -0.4 2,245,841 + CA264_09640 0.11 -0.6 2,245,841 + CA264_09640 0.11 -0.4 2,245,841 + CA264_09640 0.11 -0.1 2,245,842 - CA264_09640 0.12 +0.6
Or see this region's nucleotide sequence