Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09495 and CA264_09500 are separated by 24 nucleotides CA264_09500 and CA264_09505 are separated by 42 nucleotides CA264_09505 and CA264_09510 are separated by 371 nucleotides
CA264_09495: CA264_09495 - potassium-transporting ATPase subunit KdpA, at 2,218,915 to 2,220,612
_09495
CA264_09500: CA264_09500 - potassium-transporting ATPase subunit F, at 2,220,637 to 2,220,714
_09500
CA264_09505: CA264_09505 - hypothetical protein, at 2,220,757 to 2,221,107
_09505
CA264_09510: CA264_09510 - sigma-54-dependent Fis family transcriptional regulator, at 2,221,479 to 2,222,834
_09510
Position (kb)
2220
2221 Strain fitness (log2 ratio)
-1
0
1
2 at 2219.705 kb on + strand, within CA264_09495 at 2219.706 kb on - strand, within CA264_09495 at 2219.707 kb on + strand, within CA264_09495 at 2219.707 kb on + strand, within CA264_09495 at 2219.708 kb on - strand, within CA264_09495 at 2219.786 kb on + strand, within CA264_09495 at 2219.818 kb on + strand, within CA264_09495 at 2219.862 kb on + strand, within CA264_09495 at 2219.862 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2219.988 kb on + strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.041 kb on - strand, within CA264_09495 at 2220.062 kb on - strand, within CA264_09495 at 2220.171 kb on + strand, within CA264_09495 at 2220.227 kb on + strand, within CA264_09495 at 2220.251 kb on + strand, within CA264_09495 at 2220.251 kb on + strand, within CA264_09495 at 2220.252 kb on - strand, within CA264_09495 at 2220.292 kb on - strand, within CA264_09495 at 2220.294 kb on + strand, within CA264_09495 at 2220.420 kb on + strand, within CA264_09495 at 2220.421 kb on - strand, within CA264_09495 at 2220.421 kb on - strand, within CA264_09495 at 2220.525 kb on - strand at 2220.527 kb on - strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.598 kb on + strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.600 kb on + strand at 2220.600 kb on + strand at 2220.601 kb on - strand at 2220.601 kb on - strand at 2220.639 kb on - strand at 2220.674 kb on + strand, within CA264_09500 at 2220.695 kb on - strand, within CA264_09500 at 2220.715 kb on - strand at 2220.727 kb on + strand at 2220.729 kb on + strand at 2220.730 kb on - strand at 2220.742 kb on + strand at 2220.742 kb on + strand at 2220.837 kb on + strand, within CA264_09505 at 2220.837 kb on + strand, within CA264_09505 at 2220.849 kb on - strand, within CA264_09505 at 2220.864 kb on - strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.986 kb on + strand, within CA264_09505 at 2221.037 kb on - strand, within CA264_09505 at 2221.041 kb on + strand, within CA264_09505 at 2221.108 kb on - strand at 2221.222 kb on + strand at 2221.223 kb on - strand at 2221.227 kb on + strand at 2221.228 kb on - strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.297 kb on + strand at 2221.310 kb on + strand at 2221.310 kb on + strand at 2221.408 kb on + strand at 2221.408 kb on + strand at 2221.410 kb on + strand at 2221.410 kb on + strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.437 kb on + strand at 2221.439 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.444 kb on - strand at 2221.462 kb on + strand at 2221.464 kb on + strand at 2221.464 kb on + strand at 2221.465 kb on - strand at 2221.465 kb on - strand at 2221.620 kb on - strand, within CA264_09510 at 2221.707 kb on + strand, within CA264_09510 at 2221.708 kb on - strand, within CA264_09510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,219,705 + CA264_09495 0.47 +0.4 2,219,706 - CA264_09495 0.47 -0.2 2,219,707 + CA264_09495 0.47 -0.3 2,219,707 + CA264_09495 0.47 +0.5 2,219,708 - CA264_09495 0.47 -0.3 2,219,786 + CA264_09495 0.51 -0.2 2,219,818 + CA264_09495 0.53 -0.2 2,219,862 + CA264_09495 0.56 +0.5 2,219,862 + CA264_09495 0.56 -1.7 2,219,988 + CA264_09495 0.63 -0.3 2,219,988 + CA264_09495 0.63 -1.1 2,219,988 + CA264_09495 0.63 -0.1 2,220,041 - CA264_09495 0.66 -0.1 2,220,041 - CA264_09495 0.66 +0.2 2,220,041 - CA264_09495 0.66 +0.1 2,220,062 - CA264_09495 0.68 +0.1 2,220,171 + CA264_09495 0.74 +0.5 2,220,227 + CA264_09495 0.77 +0.5 2,220,251 + CA264_09495 0.79 -0.1 2,220,251 + CA264_09495 0.79 +0.1 2,220,252 - CA264_09495 0.79 -0.1 2,220,292 - CA264_09495 0.81 +0.5 2,220,294 + CA264_09495 0.81 +0.6 2,220,420 + CA264_09495 0.89 +0.1 2,220,421 - CA264_09495 0.89 +0.5 2,220,421 - CA264_09495 0.89 +0.8 2,220,525 - -0.1 2,220,527 - +1.0 2,220,539 + -0.3 2,220,539 + -0.6 2,220,539 + +0.4 2,220,539 + +0.2 2,220,539 + -0.0 2,220,598 + +1.3 2,220,599 - +1.5 2,220,599 - +0.6 2,220,599 - +1.5 2,220,599 - +0.4 2,220,600 + +0.5 2,220,600 + -0.1 2,220,601 - +0.2 2,220,601 - -0.5 2,220,639 - +0.2 2,220,674 + CA264_09500 0.47 +0.7 2,220,695 - CA264_09500 0.74 +0.6 2,220,715 - +1.0 2,220,727 + +0.3 2,220,729 + -0.0 2,220,730 - -0.2 2,220,742 + -0.5 2,220,742 + +0.7 2,220,837 + CA264_09505 0.23 +1.3 2,220,837 + CA264_09505 0.23 +0.4 2,220,849 - CA264_09505 0.26 +0.0 2,220,864 - CA264_09505 0.30 -1.1 2,220,869 + CA264_09505 0.32 +0.6 2,220,869 + CA264_09505 0.32 +0.3 2,220,870 - CA264_09505 0.32 +0.2 2,220,870 - CA264_09505 0.32 -0.2 2,220,986 + CA264_09505 0.65 +1.1 2,221,037 - CA264_09505 0.80 -0.2 2,221,041 + CA264_09505 0.81 -0.3 2,221,108 - +0.8 2,221,222 + -0.4 2,221,223 - +1.0 2,221,227 + -0.1 2,221,228 - -0.1 2,221,277 + +0.3 2,221,277 + +0.1 2,221,277 + -0.7 2,221,297 + +0.6 2,221,310 + -0.2 2,221,310 + -0.9 2,221,408 + -1.0 2,221,408 + -0.5 2,221,410 + -1.3 2,221,410 + +0.5 2,221,411 - +0.6 2,221,411 - +0.4 2,221,411 - -0.1 2,221,411 - -0.0 2,221,437 + +0.6 2,221,439 + -0.3 2,221,443 + -1.0 2,221,443 + -1.0 2,221,443 + +0.0 2,221,444 - -0.5 2,221,462 + -0.2 2,221,464 + +0.1 2,221,464 + -0.8 2,221,465 - -0.7 2,221,465 - +0.3 2,221,620 - CA264_09510 0.10 -0.0 2,221,707 + CA264_09510 0.17 -0.4 2,221,708 - CA264_09510 0.17 +2.2
Or see this region's nucleotide sequence