Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09265 and CA264_09270 are separated by 15 nucleotides CA264_09270 and CA264_09275 are separated by 185 nucleotides CA264_09275 and CA264_09280 are separated by 174 nucleotides
CA264_09265: CA264_09265 - XRE family transcriptional regulator, at 2,167,853 to 2,169,328
_09265
CA264_09270: CA264_09270 - tRNA-specific adenosine deaminase, at 2,169,344 to 2,169,781
_09270
CA264_09275: CA264_09275 - epimerase, at 2,169,967 to 2,171,439
_09275
CA264_09280: CA264_09280 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 2,171,614 to 2,172,561
_09280
Position (kb)
2169
2170
2171
2172 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2169.051 kb on - strand, within CA264_09265 at 2169.072 kb on - strand, within CA264_09265 at 2169.116 kb on - strand, within CA264_09265 at 2169.187 kb on + strand at 2169.232 kb on - strand at 2169.265 kb on - strand at 2169.265 kb on - strand at 2169.265 kb on - strand at 2169.388 kb on + strand, within CA264_09270 at 2169.388 kb on + strand, within CA264_09270 at 2169.564 kb on + strand, within CA264_09270 at 2169.735 kb on + strand, within CA264_09270 at 2169.808 kb on - strand at 2169.809 kb on + strand at 2169.809 kb on + strand at 2169.810 kb on - strand at 2169.810 kb on - strand at 2169.813 kb on - strand at 2169.858 kb on - strand at 2169.871 kb on + strand at 2169.872 kb on - strand at 2169.895 kb on + strand at 2169.899 kb on + strand at 2169.900 kb on - strand at 2169.929 kb on - strand at 2169.929 kb on - strand at 2169.952 kb on - strand at 2169.956 kb on + strand at 2169.956 kb on + strand at 2169.966 kb on + strand at 2169.967 kb on - strand at 2169.974 kb on + strand at 2169.974 kb on + strand at 2169.975 kb on - strand at 2169.997 kb on + strand at 2170.046 kb on + strand at 2170.046 kb on + strand at 2170.106 kb on + strand at 2170.107 kb on - strand at 2170.107 kb on - strand at 2170.115 kb on + strand, within CA264_09275 at 2170.116 kb on - strand, within CA264_09275 at 2170.116 kb on - strand, within CA264_09275 at 2170.127 kb on + strand, within CA264_09275 at 2170.127 kb on + strand, within CA264_09275 at 2170.158 kb on + strand, within CA264_09275 at 2170.158 kb on + strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.291 kb on + strand, within CA264_09275 at 2170.407 kb on + strand, within CA264_09275 at 2170.470 kb on + strand, within CA264_09275 at 2170.471 kb on - strand, within CA264_09275 at 2170.471 kb on - strand, within CA264_09275 at 2170.535 kb on - strand, within CA264_09275 at 2170.548 kb on - strand, within CA264_09275 at 2170.548 kb on - strand, within CA264_09275 at 2170.605 kb on + strand, within CA264_09275 at 2170.606 kb on - strand, within CA264_09275 at 2170.657 kb on + strand, within CA264_09275 at 2170.657 kb on + strand, within CA264_09275 at 2170.665 kb on - strand, within CA264_09275 at 2170.708 kb on + strand, within CA264_09275 at 2170.709 kb on - strand, within CA264_09275 at 2170.729 kb on + strand, within CA264_09275 at 2170.730 kb on - strand, within CA264_09275 at 2170.794 kb on - strand, within CA264_09275 at 2170.825 kb on + strand, within CA264_09275 at 2170.826 kb on - strand, within CA264_09275 at 2170.924 kb on + strand, within CA264_09275 at 2170.924 kb on + strand, within CA264_09275 at 2170.924 kb on + strand, within CA264_09275 at 2170.925 kb on - strand, within CA264_09275 at 2171.047 kb on + strand, within CA264_09275 at 2171.050 kb on - strand, within CA264_09275 at 2171.254 kb on - strand, within CA264_09275 at 2171.254 kb on - strand, within CA264_09275 at 2171.254 kb on - strand, within CA264_09275 at 2171.437 kb on + strand at 2171.438 kb on - strand at 2171.459 kb on - strand at 2171.461 kb on - strand at 2171.461 kb on - strand at 2171.466 kb on - strand at 2171.473 kb on + strand at 2171.479 kb on + strand at 2171.491 kb on + strand at 2171.491 kb on + strand at 2171.513 kb on + strand at 2171.578 kb on + strand at 2171.578 kb on + strand at 2171.582 kb on + strand at 2171.597 kb on - strand at 2171.613 kb on - strand at 2171.771 kb on - strand, within CA264_09280 at 2171.784 kb on - strand, within CA264_09280 at 2171.843 kb on + strand, within CA264_09280 at 2171.895 kb on + strand, within CA264_09280 at 2171.947 kb on + strand, within CA264_09280 at 2171.948 kb on - strand, within CA264_09280 at 2172.104 kb on + strand, within CA264_09280 at 2172.104 kb on + strand, within CA264_09280 at 2172.104 kb on + strand, within CA264_09280 at 2172.105 kb on - strand, within CA264_09280 at 2172.208 kb on + strand, within CA264_09280 at 2172.225 kb on + strand, within CA264_09280 at 2172.284 kb on - strand, within CA264_09280
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,169,051 - CA264_09265 0.81 -0.1 2,169,072 - CA264_09265 0.83 -0.4 2,169,116 - CA264_09265 0.86 -1.5 2,169,187 + +0.1 2,169,232 - +0.5 2,169,265 - +2.5 2,169,265 - -0.2 2,169,265 - +1.2 2,169,388 + CA264_09270 0.10 +0.0 2,169,388 + CA264_09270 0.10 -0.4 2,169,564 + CA264_09270 0.50 +0.1 2,169,735 + CA264_09270 0.89 +0.3 2,169,808 - -0.4 2,169,809 + -0.2 2,169,809 + -0.6 2,169,810 - -0.2 2,169,810 - -0.3 2,169,813 - -0.3 2,169,858 - -0.1 2,169,871 + -0.1 2,169,872 - -0.2 2,169,895 + +0.3 2,169,899 + +0.5 2,169,900 - +0.6 2,169,929 - +0.3 2,169,929 - +0.4 2,169,952 - +0.8 2,169,956 + +0.2 2,169,956 + -0.0 2,169,966 + +0.3 2,169,967 - -1.0 2,169,974 + +0.0 2,169,974 + -0.3 2,169,975 - -0.0 2,169,997 + +0.1 2,170,046 + -0.5 2,170,046 + +0.3 2,170,106 + -1.8 2,170,107 - +0.3 2,170,107 - -0.5 2,170,115 + CA264_09275 0.10 +0.7 2,170,116 - CA264_09275 0.10 -0.0 2,170,116 - CA264_09275 0.10 -0.4 2,170,127 + CA264_09275 0.11 -1.1 2,170,127 + CA264_09275 0.11 +0.5 2,170,158 + CA264_09275 0.13 +0.3 2,170,158 + CA264_09275 0.13 +1.1 2,170,159 - CA264_09275 0.13 -0.7 2,170,159 - CA264_09275 0.13 +0.1 2,170,159 - CA264_09275 0.13 +0.9 2,170,164 + CA264_09275 0.13 -0.4 2,170,164 + CA264_09275 0.13 -0.2 2,170,164 + CA264_09275 0.13 -0.1 2,170,165 - CA264_09275 0.13 +0.2 2,170,165 - CA264_09275 0.13 +0.9 2,170,165 - CA264_09275 0.13 -0.5 2,170,165 - CA264_09275 0.13 +0.5 2,170,165 - CA264_09275 0.13 +0.2 2,170,291 + CA264_09275 0.22 +1.3 2,170,407 + CA264_09275 0.30 +0.9 2,170,470 + CA264_09275 0.34 -1.5 2,170,471 - CA264_09275 0.34 +0.5 2,170,471 - CA264_09275 0.34 +1.1 2,170,535 - CA264_09275 0.39 -0.0 2,170,548 - CA264_09275 0.39 +0.0 2,170,548 - CA264_09275 0.39 +0.2 2,170,605 + CA264_09275 0.43 +0.2 2,170,606 - CA264_09275 0.43 +0.3 2,170,657 + CA264_09275 0.47 +0.4 2,170,657 + CA264_09275 0.47 +0.1 2,170,665 - CA264_09275 0.47 -0.4 2,170,708 + CA264_09275 0.50 -0.1 2,170,709 - CA264_09275 0.50 +0.1 2,170,729 + CA264_09275 0.52 +0.2 2,170,730 - CA264_09275 0.52 +0.9 2,170,794 - CA264_09275 0.56 -0.4 2,170,825 + CA264_09275 0.58 +1.9 2,170,826 - CA264_09275 0.58 +0.2 2,170,924 + CA264_09275 0.65 -0.2 2,170,924 + CA264_09275 0.65 +0.9 2,170,924 + CA264_09275 0.65 +1.1 2,170,925 - CA264_09275 0.65 -0.4 2,171,047 + CA264_09275 0.73 -0.2 2,171,050 - CA264_09275 0.74 +0.1 2,171,254 - CA264_09275 0.87 -0.4 2,171,254 - CA264_09275 0.87 -0.3 2,171,254 - CA264_09275 0.87 +0.4 2,171,437 + -0.2 2,171,438 - +0.0 2,171,459 - -0.0 2,171,461 - -0.3 2,171,461 - -0.6 2,171,466 - -0.0 2,171,473 + +0.1 2,171,479 + +0.2 2,171,491 + +0.6 2,171,491 + +0.7 2,171,513 + -0.1 2,171,578 + +0.9 2,171,578 + -0.1 2,171,582 + +0.1 2,171,597 - +0.3 2,171,613 - -0.2 2,171,771 - CA264_09280 0.17 -1.0 2,171,784 - CA264_09280 0.18 +0.3 2,171,843 + CA264_09280 0.24 -0.1 2,171,895 + CA264_09280 0.30 +1.5 2,171,947 + CA264_09280 0.35 +0.6 2,171,948 - CA264_09280 0.35 +0.1 2,172,104 + CA264_09280 0.52 +1.1 2,172,104 + CA264_09280 0.52 +0.6 2,172,104 + CA264_09280 0.52 +0.2 2,172,105 - CA264_09280 0.52 +0.1 2,172,208 + CA264_09280 0.63 -0.1 2,172,225 + CA264_09280 0.64 +0.5 2,172,284 - CA264_09280 0.71 +0.0
Or see this region's nucleotide sequence