Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07470 and CA264_07475 are separated by 56 nucleotides CA264_07475 and CA264_07480 are separated by 20 nucleotides CA264_07480 and CA264_07485 are separated by 3 nucleotides
CA264_07470: CA264_07470 - glucose-6-phosphate isomerase, at 1,729,258 to 1,730,904
_07470
CA264_07475: CA264_07475 - hypothetical protein, at 1,730,961 to 1,732,550
_07475
CA264_07480: CA264_07480 - DUF58 domain-containing protein, at 1,732,571 to 1,733,482
_07480
CA264_07485: CA264_07485 - septal ring lytic transglycosylase RlpA family lipoprotein, at 1,733,486 to 1,733,899
_07485
Position (kb)
1730
1731
1732
1733 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1729.993 kb on - strand, within CA264_07470 at 1730.281 kb on + strand, within CA264_07470 at 1730.676 kb on + strand, within CA264_07470 at 1730.820 kb on - strand at 1730.903 kb on - strand at 1730.926 kb on - strand at 1730.926 kb on - strand at 1730.934 kb on - strand at 1730.947 kb on + strand at 1730.955 kb on + strand at 1730.955 kb on + strand at 1730.956 kb on - strand at 1730.956 kb on - strand at 1730.960 kb on + strand at 1730.960 kb on + strand at 1730.960 kb on + strand at 1730.961 kb on - strand at 1731.001 kb on + strand at 1731.061 kb on + strand at 1731.118 kb on - strand at 1731.217 kb on - strand, within CA264_07475 at 1731.227 kb on - strand, within CA264_07475 at 1731.233 kb on - strand, within CA264_07475 at 1731.298 kb on - strand, within CA264_07475 at 1731.317 kb on + strand, within CA264_07475 at 1731.415 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.449 kb on - strand, within CA264_07475 at 1731.474 kb on + strand, within CA264_07475 at 1731.475 kb on - strand, within CA264_07475 at 1731.520 kb on + strand, within CA264_07475 at 1731.573 kb on - strand, within CA264_07475 at 1731.648 kb on + strand, within CA264_07475 at 1731.655 kb on + strand, within CA264_07475 at 1731.761 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.766 kb on - strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.769 kb on - strand, within CA264_07475 at 1731.904 kb on - strand, within CA264_07475 at 1731.925 kb on + strand, within CA264_07475 at 1731.926 kb on - strand, within CA264_07475 at 1732.125 kb on + strand, within CA264_07475 at 1732.126 kb on - strand, within CA264_07475 at 1732.126 kb on - strand, within CA264_07475 at 1732.339 kb on + strand, within CA264_07475 at 1732.352 kb on - strand, within CA264_07475 at 1732.378 kb on - strand, within CA264_07475 at 1732.378 kb on - strand, within CA264_07475 at 1732.437 kb on + strand at 1732.437 kb on + strand at 1732.438 kb on - strand at 1732.439 kb on + strand at 1732.440 kb on - strand at 1732.447 kb on + strand at 1732.447 kb on + strand at 1732.448 kb on - strand at 1732.475 kb on + strand at 1732.517 kb on - strand at 1732.593 kb on - strand at 1732.593 kb on - strand at 1732.605 kb on + strand at 1732.615 kb on + strand at 1732.616 kb on - strand at 1732.659 kb on + strand at 1732.714 kb on - strand, within CA264_07480 at 1732.780 kb on - strand, within CA264_07480 at 1732.842 kb on - strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1733.203 kb on - strand, within CA264_07480 at 1733.205 kb on + strand, within CA264_07480 at 1733.205 kb on + strand, within CA264_07480 at 1733.206 kb on - strand, within CA264_07480 at 1733.209 kb on + strand, within CA264_07480 at 1733.263 kb on - strand, within CA264_07480 at 1733.338 kb on - strand, within CA264_07480 at 1733.453 kb on + strand at 1733.454 kb on - strand at 1733.495 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 1,729,993 - CA264_07470 0.45 +0.4 1,730,281 + CA264_07470 0.62 -0.6 1,730,676 + CA264_07470 0.86 +0.9 1,730,820 - -0.6 1,730,903 - +0.5 1,730,926 - +0.3 1,730,926 - +0.2 1,730,934 - +2.2 1,730,947 + -1.2 1,730,955 + -1.2 1,730,955 + -2.3 1,730,956 - +0.2 1,730,956 - +0.5 1,730,960 + +0.4 1,730,960 + +0.2 1,730,960 + +0.4 1,730,961 - -0.0 1,731,001 + +0.0 1,731,061 + +1.0 1,731,118 - -0.3 1,731,217 - CA264_07475 0.16 -1.6 1,731,227 - CA264_07475 0.17 -0.1 1,731,233 - CA264_07475 0.17 +0.3 1,731,298 - CA264_07475 0.21 +0.0 1,731,317 + CA264_07475 0.22 -0.6 1,731,415 + CA264_07475 0.29 +0.1 1,731,448 + CA264_07475 0.31 -1.3 1,731,448 + CA264_07475 0.31 +0.8 1,731,448 + CA264_07475 0.31 -1.6 1,731,449 - CA264_07475 0.31 +0.0 1,731,474 + CA264_07475 0.32 -1.3 1,731,475 - CA264_07475 0.32 -0.1 1,731,520 + CA264_07475 0.35 +0.3 1,731,573 - CA264_07475 0.38 +0.2 1,731,648 + CA264_07475 0.43 -0.1 1,731,655 + CA264_07475 0.44 +0.0 1,731,761 + CA264_07475 0.50 -0.2 1,731,765 + CA264_07475 0.51 +0.2 1,731,765 + CA264_07475 0.51 +0.9 1,731,765 + CA264_07475 0.51 +0.8 1,731,766 - CA264_07475 0.51 -0.3 1,731,768 + CA264_07475 0.51 +0.3 1,731,768 + CA264_07475 0.51 +0.3 1,731,769 - CA264_07475 0.51 +0.6 1,731,904 - CA264_07475 0.59 +0.0 1,731,925 + CA264_07475 0.61 -0.3 1,731,926 - CA264_07475 0.61 +0.3 1,732,125 + CA264_07475 0.73 +1.6 1,732,126 - CA264_07475 0.73 -0.4 1,732,126 - CA264_07475 0.73 +0.4 1,732,339 + CA264_07475 0.87 -0.2 1,732,352 - CA264_07475 0.87 -0.1 1,732,378 - CA264_07475 0.89 -0.5 1,732,378 - CA264_07475 0.89 -0.3 1,732,437 + -0.3 1,732,437 + +0.6 1,732,438 - +0.2 1,732,439 + +0.5 1,732,440 - -0.1 1,732,447 + -0.8 1,732,447 + +0.2 1,732,448 - +0.3 1,732,475 + -1.7 1,732,517 - +1.1 1,732,593 - -1.0 1,732,593 - -0.5 1,732,605 + +1.8 1,732,615 + +0.1 1,732,616 - +0.2 1,732,659 + +0.4 1,732,714 - CA264_07480 0.16 +0.1 1,732,780 - CA264_07480 0.23 -1.1 1,732,842 - CA264_07480 0.30 -0.5 1,732,910 + CA264_07480 0.37 +0.3 1,732,910 + CA264_07480 0.37 +1.6 1,732,910 + CA264_07480 0.37 +0.6 1,733,203 - CA264_07480 0.69 -0.6 1,733,205 + CA264_07480 0.70 -0.2 1,733,205 + CA264_07480 0.70 +0.6 1,733,206 - CA264_07480 0.70 +2.1 1,733,209 + CA264_07480 0.70 -0.3 1,733,263 - CA264_07480 0.76 -0.2 1,733,338 - CA264_07480 0.84 -0.3 1,733,453 + -0.6 1,733,454 - -0.4 1,733,495 - -0.4
Or see this region's nucleotide sequence