Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06205

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06200 and CA264_06205 overlap by 7 nucleotidesCA264_06205 and CA264_06210 overlap by 8 nucleotides CA264_06200: CA264_06200 - N-formylglutamate amidohydrolase, at 1,443,542 to 1,444,270 _06200 CA264_06205: CA264_06205 - glutamate--cysteine ligase, at 1,444,264 to 1,445,511 _06205 CA264_06210: CA264_06210 - glutathione synthase, at 1,445,504 to 1,446,979 _06210 Position (kb) 1444 1445 1446Strain fitness (log2 ratio) -2 -1 0 1 2at 1443.276 kb on + strandat 1443.318 kb on - strandat 1443.365 kb on - strandat 1443.400 kb on - strandat 1443.404 kb on + strandat 1443.404 kb on + strandat 1443.404 kb on + strandat 1443.405 kb on - strandat 1443.405 kb on - strandat 1443.415 kb on - strandat 1443.430 kb on - strandat 1443.438 kb on - strandat 1443.502 kb on + strandat 1443.503 kb on - strandat 1443.503 kb on - strandat 1443.507 kb on + strandat 1443.688 kb on - strand, within CA264_06200at 1443.717 kb on + strand, within CA264_06200at 1443.748 kb on - strand, within CA264_06200at 1443.759 kb on + strand, within CA264_06200at 1443.857 kb on + strand, within CA264_06200at 1443.857 kb on + strand, within CA264_06200at 1443.857 kb on + strand, within CA264_06200at 1443.858 kb on - strand, within CA264_06200at 1443.858 kb on - strand, within CA264_06200at 1443.901 kb on + strand, within CA264_06200at 1443.902 kb on - strand, within CA264_06200at 1443.950 kb on + strand, within CA264_06200at 1443.950 kb on + strand, within CA264_06200at 1443.950 kb on + strand, within CA264_06200at 1443.950 kb on + strand, within CA264_06200at 1443.962 kb on + strand, within CA264_06200at 1443.963 kb on - strand, within CA264_06200at 1443.981 kb on - strand, within CA264_06200at 1443.981 kb on - strand, within CA264_06200at 1443.984 kb on + strand, within CA264_06200at 1443.984 kb on + strand, within CA264_06200at 1443.984 kb on + strand, within CA264_06200at 1443.984 kb on + strand, within CA264_06200at 1443.985 kb on - strand, within CA264_06200at 1443.985 kb on - strand, within CA264_06200at 1443.988 kb on - strand, within CA264_06200at 1444.184 kb on + strand, within CA264_06200at 1444.185 kb on - strand, within CA264_06200at 1444.185 kb on - strand, within CA264_06200at 1444.185 kb on - strand, within CA264_06200at 1444.185 kb on - strand, within CA264_06200at 1444.215 kb on + strandat 1444.253 kb on + strandat 1444.253 kb on + strandat 1444.253 kb on + strandat 1444.257 kb on - strandat 1444.265 kb on + strandat 1444.265 kb on + strandat 1444.265 kb on + strandat 1444.266 kb on - strandat 1444.276 kb on - strandat 1444.327 kb on + strandat 1444.328 kb on - strandat 1444.470 kb on - strand, within CA264_06205at 1444.528 kb on - strand, within CA264_06205at 1444.567 kb on + strand, within CA264_06205at 1444.583 kb on - strand, within CA264_06205at 1444.866 kb on + strand, within CA264_06205at 1445.060 kb on + strand, within CA264_06205at 1445.061 kb on - strand, within CA264_06205at 1445.061 kb on - strand, within CA264_06205at 1445.141 kb on + strand, within CA264_06205at 1445.250 kb on + strand, within CA264_06205at 1445.387 kb on + strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.406 kb on - strandat 1445.421 kb on + strandat 1445.463 kb on - strandat 1445.463 kb on - strandat 1445.527 kb on + strandat 1445.551 kb on + strandat 1445.558 kb on + strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.569 kb on + strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.571 kb on + strandat 1445.572 kb on - strandat 1445.594 kb on - strandat 1445.636 kb on + strandat 1445.636 kb on + strandat 1445.643 kb on + strandat 1445.644 kb on - strandat 1445.644 kb on - strandat 1445.805 kb on + strand, within CA264_06210at 1445.805 kb on + strand, within CA264_06210at 1445.805 kb on + strand, within CA264_06210at 1445.807 kb on + strand, within CA264_06210at 1445.807 kb on + strand, within CA264_06210at 1445.808 kb on - strand, within CA264_06210at 1445.832 kb on + strand, within CA264_06210at 1445.832 kb on + strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.835 kb on + strand, within CA264_06210at 1445.836 kb on - strand, within CA264_06210at 1446.167 kb on + strand, within CA264_06210at 1446.210 kb on + strand, within CA264_06210at 1446.210 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.243 kb on - strand, within CA264_06210at 1446.243 kb on - strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.289 kb on + strand, within CA264_06210at 1446.304 kb on - strand, within CA264_06210at 1446.383 kb on + strand, within CA264_06210at 1446.402 kb on + strand, within CA264_06210at 1446.402 kb on + strand, within CA264_06210at 1446.403 kb on - strand, within CA264_06210at 1446.403 kb on - strand, within CA264_06210

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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1,443,276 + -0.8
1,443,318 - +0.1
1,443,365 - +0.1
1,443,400 - -0.8
1,443,404 + +1.0
1,443,404 + -1.8
1,443,404 + -0.4
1,443,405 - +0.0
1,443,405 - +0.4
1,443,415 - -0.1
1,443,430 - -0.4
1,443,438 - -0.4
1,443,502 + +0.9
1,443,503 - -0.2
1,443,503 - +0.3
1,443,507 + -0.3
1,443,688 - CA264_06200 0.20 -0.5
1,443,717 + CA264_06200 0.24 -0.0
1,443,748 - CA264_06200 0.28 -2.1
1,443,759 + CA264_06200 0.30 +0.7
1,443,857 + CA264_06200 0.43 -0.6
1,443,857 + CA264_06200 0.43 +1.2
1,443,857 + CA264_06200 0.43 -1.1
1,443,858 - CA264_06200 0.43 -0.4
1,443,858 - CA264_06200 0.43 -0.9
1,443,901 + CA264_06200 0.49 +0.3
1,443,902 - CA264_06200 0.49 +0.1
1,443,950 + CA264_06200 0.56 +0.1
1,443,950 + CA264_06200 0.56 +1.0
1,443,950 + CA264_06200 0.56 -0.1
1,443,950 + CA264_06200 0.56 -0.0
1,443,962 + CA264_06200 0.58 +0.0
1,443,963 - CA264_06200 0.58 +0.1
1,443,981 - CA264_06200 0.60 +0.1
1,443,981 - CA264_06200 0.60 +0.4
1,443,984 + CA264_06200 0.61 -0.4
1,443,984 + CA264_06200 0.61 -0.4
1,443,984 + CA264_06200 0.61 -1.8
1,443,984 + CA264_06200 0.61 -0.3
1,443,985 - CA264_06200 0.61 +0.0
1,443,985 - CA264_06200 0.61 +0.1
1,443,988 - CA264_06200 0.61 +0.8
1,444,184 + CA264_06200 0.88 +0.8
1,444,185 - CA264_06200 0.88 -1.8
1,444,185 - CA264_06200 0.88 +1.4
1,444,185 - CA264_06200 0.88 -1.1
1,444,185 - CA264_06200 0.88 -0.1
1,444,215 + -0.5
1,444,253 + +1.2
1,444,253 + +0.2
1,444,253 + -0.1
1,444,257 - -0.0
1,444,265 + +0.8
1,444,265 + -1.6
1,444,265 + -0.1
1,444,266 - -0.0
1,444,276 - +0.6
1,444,327 + -0.3
1,444,328 - -0.1
1,444,470 - CA264_06205 0.17 -0.1
1,444,528 - CA264_06205 0.21 +0.4
1,444,567 + CA264_06205 0.24 -0.3
1,444,583 - CA264_06205 0.26 +0.0
1,444,866 + CA264_06205 0.48 -0.3
1,445,060 + CA264_06205 0.64 -0.6
1,445,061 - CA264_06205 0.64 +0.1
1,445,061 - CA264_06205 0.64 +2.1
1,445,141 + CA264_06205 0.70 -0.5
1,445,250 + CA264_06205 0.79 +0.1
1,445,387 + -0.2
1,445,388 - +1.0
1,445,388 - +0.6
1,445,388 - +1.2
1,445,388 - -1.4
1,445,406 - -1.6
1,445,421 + +0.2
1,445,463 - +0.8
1,445,463 - +0.4
1,445,527 + +1.2
1,445,551 + +0.2
1,445,558 + -1.1
1,445,559 - -0.5
1,445,559 - -2.2
1,445,559 - -0.8
1,445,559 - -0.7
1,445,559 - -0.1
1,445,569 + -0.3
1,445,570 - +0.4
1,445,570 - -0.2
1,445,570 - +0.9
1,445,570 - +1.3
1,445,570 - -0.2
1,445,571 + -2.3
1,445,572 - -1.6
1,445,594 - -0.2
1,445,636 + -0.3
1,445,636 + -0.4
1,445,643 + -1.1
1,445,644 - +0.0
1,445,644 - -0.3
1,445,805 + CA264_06210 0.20 +0.1
1,445,805 + CA264_06210 0.20 +0.6
1,445,805 + CA264_06210 0.20 -0.5
1,445,807 + CA264_06210 0.21 +2.4
1,445,807 + CA264_06210 0.21 -0.2
1,445,808 - CA264_06210 0.21 +0.4
1,445,832 + CA264_06210 0.22 -0.4
1,445,832 + CA264_06210 0.22 -0.1
1,445,833 - CA264_06210 0.22 -0.7
1,445,833 - CA264_06210 0.22 +0.0
1,445,833 - CA264_06210 0.22 -0.0
1,445,835 + CA264_06210 0.22 -0.3
1,445,836 - CA264_06210 0.22 -1.8
1,446,167 + CA264_06210 0.45 +0.4
1,446,210 + CA264_06210 0.48 +0.4
1,446,210 + CA264_06210 0.48 -0.5
1,446,214 + CA264_06210 0.48 +0.4
1,446,214 + CA264_06210 0.48 +0.3
1,446,214 + CA264_06210 0.48 -0.7
1,446,214 + CA264_06210 0.48 -0.6
1,446,214 + CA264_06210 0.48 +0.3
1,446,243 - CA264_06210 0.50 -0.8
1,446,243 - CA264_06210 0.50 +0.6
1,446,244 + CA264_06210 0.50 +0.4
1,446,244 + CA264_06210 0.50 -0.2
1,446,244 + CA264_06210 0.50 -0.2
1,446,245 - CA264_06210 0.50 +0.6
1,446,245 - CA264_06210 0.50 -0.2
1,446,245 - CA264_06210 0.50 -0.9
1,446,289 + CA264_06210 0.53 +0.4
1,446,304 - CA264_06210 0.54 -0.5
1,446,383 + CA264_06210 0.60 +0.1
1,446,402 + CA264_06210 0.61 -0.9
1,446,402 + CA264_06210 0.61 +0.7
1,446,403 - CA264_06210 0.61 +0.1
1,446,403 - CA264_06210 0.61 -0.5

Or see this region's nucleotide sequence