Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05655 and CA264_05660 are separated by 184 nucleotides CA264_05660 and CA264_05665 are separated by 193 nucleotides
CA264_05655: CA264_05655 - FAD-binding protein, at 1,313,915 to 1,315,495
_05655
CA264_05660: CA264_05660 - CoA-binding protein, at 1,315,680 to 1,316,042
_05660
CA264_05665: CA264_05665 - hypothetical protein, at 1,316,236 to 1,317,069
_05665
Position (kb)
1315
1316
1317 Strain fitness (log2 ratio)
-2
-1
0
1 at 1314.712 kb on - strand, within CA264_05655 at 1314.772 kb on + strand, within CA264_05655 at 1314.775 kb on - strand, within CA264_05655 at 1314.779 kb on + strand, within CA264_05655 at 1314.780 kb on - strand, within CA264_05655 at 1314.847 kb on + strand, within CA264_05655 at 1314.848 kb on - strand, within CA264_05655 at 1314.936 kb on + strand, within CA264_05655 at 1314.943 kb on + strand, within CA264_05655 at 1315.265 kb on - strand, within CA264_05655 at 1315.482 kb on + strand at 1315.491 kb on + strand at 1315.492 kb on - strand at 1315.492 kb on - strand at 1315.493 kb on + strand at 1315.493 kb on + strand at 1315.521 kb on + strand at 1315.522 kb on - strand at 1315.522 kb on - strand at 1315.522 kb on - strand at 1315.525 kb on + strand at 1315.525 kb on + strand at 1315.526 kb on - strand at 1315.526 kb on - strand at 1315.526 kb on - strand at 1315.545 kb on + strand at 1315.545 kb on + strand at 1315.546 kb on - strand at 1315.563 kb on + strand at 1315.564 kb on - strand at 1315.580 kb on - strand at 1315.592 kb on - strand at 1315.592 kb on - strand at 1315.696 kb on + strand at 1315.696 kb on + strand at 1315.697 kb on - strand at 1315.699 kb on + strand at 1315.700 kb on - strand at 1315.732 kb on - strand, within CA264_05660 at 1315.732 kb on - strand, within CA264_05660 at 1315.859 kb on + strand, within CA264_05660 at 1315.866 kb on + strand, within CA264_05660 at 1315.866 kb on + strand, within CA264_05660 at 1315.870 kb on + strand, within CA264_05660 at 1315.870 kb on + strand, within CA264_05660 at 1315.896 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.904 kb on + strand, within CA264_05660 at 1315.904 kb on + strand, within CA264_05660 at 1316.018 kb on + strand at 1316.034 kb on - strand at 1316.040 kb on + strand at 1316.092 kb on + strand at 1316.120 kb on - strand at 1316.120 kb on - strand at 1316.127 kb on + strand at 1316.134 kb on + strand at 1316.138 kb on + strand at 1316.176 kb on - strand at 1316.188 kb on - strand at 1316.329 kb on - strand, within CA264_05665 at 1316.589 kb on - strand, within CA264_05665 at 1316.613 kb on + strand, within CA264_05665 at 1316.613 kb on + strand, within CA264_05665 at 1316.641 kb on + strand, within CA264_05665 at 1316.642 kb on - strand, within CA264_05665 at 1316.689 kb on + strand, within CA264_05665 at 1316.713 kb on - strand, within CA264_05665 at 1316.821 kb on + strand, within CA264_05665 at 1316.821 kb on + strand, within CA264_05665 at 1316.875 kb on - strand, within CA264_05665 at 1316.956 kb on + strand, within CA264_05665 at 1316.957 kb on - strand, within CA264_05665 at 1316.957 kb on - strand, within CA264_05665 at 1316.958 kb on + strand, within CA264_05665 at 1316.958 kb on + strand, within CA264_05665 at 1316.964 kb on + strand, within CA264_05665 at 1316.966 kb on + strand, within CA264_05665
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 1,314,712 - CA264_05655 0.50 -0.1 1,314,772 + CA264_05655 0.54 +1.5 1,314,775 - CA264_05655 0.54 -0.3 1,314,779 + CA264_05655 0.55 -0.7 1,314,780 - CA264_05655 0.55 +0.2 1,314,847 + CA264_05655 0.59 +0.6 1,314,848 - CA264_05655 0.59 -0.7 1,314,936 + CA264_05655 0.65 -1.8 1,314,943 + CA264_05655 0.65 +1.0 1,315,265 - CA264_05655 0.85 -0.2 1,315,482 + -0.3 1,315,491 + +0.2 1,315,492 - -0.0 1,315,492 - -1.4 1,315,493 + -0.0 1,315,493 + -1.4 1,315,521 + -0.6 1,315,522 - -0.4 1,315,522 - -1.0 1,315,522 - +1.0 1,315,525 + +0.5 1,315,525 + -0.9 1,315,526 - +0.0 1,315,526 - +0.4 1,315,526 - -0.9 1,315,545 + +0.8 1,315,545 + -1.2 1,315,546 - -0.9 1,315,563 + +0.1 1,315,564 - +0.4 1,315,580 - -0.3 1,315,592 - -0.1 1,315,592 - -1.0 1,315,696 + +0.5 1,315,696 + -0.9 1,315,697 - -0.2 1,315,699 + -0.5 1,315,700 - -0.1 1,315,732 - CA264_05660 0.14 -0.1 1,315,732 - CA264_05660 0.14 -0.8 1,315,859 + CA264_05660 0.49 -0.1 1,315,866 + CA264_05660 0.51 +0.4 1,315,866 + CA264_05660 0.51 -0.0 1,315,870 + CA264_05660 0.52 -1.3 1,315,870 + CA264_05660 0.52 +0.4 1,315,896 + CA264_05660 0.60 +0.3 1,315,902 + CA264_05660 0.61 +1.4 1,315,902 + CA264_05660 0.61 -0.2 1,315,902 + CA264_05660 0.61 +0.1 1,315,903 - CA264_05660 0.61 +0.8 1,315,903 - CA264_05660 0.61 +0.6 1,315,903 - CA264_05660 0.61 -0.2 1,315,903 - CA264_05660 0.61 -0.7 1,315,904 + CA264_05660 0.62 +1.7 1,315,904 + CA264_05660 0.62 +1.1 1,316,018 + -1.0 1,316,034 - +0.7 1,316,040 + +1.1 1,316,092 + +0.4 1,316,120 - +0.2 1,316,120 - +0.5 1,316,127 + +0.2 1,316,134 + -0.4 1,316,138 + +0.6 1,316,176 - -0.4 1,316,188 - +0.3 1,316,329 - CA264_05665 0.11 -1.5 1,316,589 - CA264_05665 0.42 -0.2 1,316,613 + CA264_05665 0.45 -1.2 1,316,613 + CA264_05665 0.45 -1.5 1,316,641 + CA264_05665 0.49 -1.4 1,316,642 - CA264_05665 0.49 +0.6 1,316,689 + CA264_05665 0.54 +0.6 1,316,713 - CA264_05665 0.57 +0.0 1,316,821 + CA264_05665 0.70 +0.1 1,316,821 + CA264_05665 0.70 +0.1 1,316,875 - CA264_05665 0.77 -0.6 1,316,956 + CA264_05665 0.86 +0.3 1,316,957 - CA264_05665 0.86 -0.1 1,316,957 - CA264_05665 0.86 +1.4 1,316,958 + CA264_05665 0.87 +0.4 1,316,958 + CA264_05665 0.87 +0.3 1,316,964 + CA264_05665 0.87 -0.2 1,316,966 + CA264_05665 0.88 -0.2
Or see this region's nucleotide sequence