Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05105 and CA264_05110 overlap by 7 nucleotides CA264_05110 and CA264_05115 are separated by 75 nucleotides CA264_05115 and CA264_05120 are separated by 56 nucleotides
CA264_05105: CA264_05105 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 1,181,455 to 1,182,177
_05105
CA264_05110: CA264_05110 - imidazole glycerol phosphate synthase cyclase subunit, at 1,182,171 to 1,182,929
_05110
CA264_05115: CA264_05115 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase, at 1,183,005 to 1,183,613
_05115
CA264_05120: CA264_05120 - alpha/beta hydrolase, at 1,183,670 to 1,184,536
_05120
Position (kb)
1183
1184 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1182.044 kb on + strand, within CA264_05105 at 1182.069 kb on - strand, within CA264_05105 at 1182.096 kb on - strand, within CA264_05105 at 1182.101 kb on + strand, within CA264_05105 at 1182.102 kb on - strand, within CA264_05105 at 1182.102 kb on - strand, within CA264_05105 at 1182.112 kb on - strand at 1182.112 kb on - strand at 1182.115 kb on - strand at 1182.130 kb on + strand at 1182.131 kb on - strand at 1182.131 kb on - strand at 1182.131 kb on - strand at 1182.150 kb on - strand at 1182.223 kb on + strand at 1182.224 kb on - strand at 1182.286 kb on - strand, within CA264_05110 at 1182.286 kb on - strand, within CA264_05110 at 1182.336 kb on - strand, within CA264_05110 at 1182.347 kb on + strand, within CA264_05110 at 1182.508 kb on + strand, within CA264_05110 at 1182.592 kb on + strand, within CA264_05110 at 1182.592 kb on + strand, within CA264_05110 at 1182.594 kb on + strand, within CA264_05110 at 1182.629 kb on + strand, within CA264_05110 at 1182.630 kb on - strand, within CA264_05110 at 1182.634 kb on + strand, within CA264_05110 at 1182.634 kb on + strand, within CA264_05110 at 1182.662 kb on - strand, within CA264_05110 at 1182.728 kb on + strand, within CA264_05110 at 1182.731 kb on + strand, within CA264_05110 at 1182.816 kb on - strand, within CA264_05110 at 1182.888 kb on - strand at 1182.894 kb on + strand at 1182.894 kb on + strand at 1182.971 kb on + strand at 1182.972 kb on - strand at 1182.972 kb on - strand at 1182.976 kb on + strand at 1182.976 kb on + strand at 1182.976 kb on + strand at 1182.976 kb on + strand at 1182.977 kb on - strand at 1182.992 kb on + strand at 1182.992 kb on + strand at 1183.012 kb on + strand at 1183.058 kb on + strand at 1183.090 kb on - strand, within CA264_05115 at 1183.090 kb on - strand, within CA264_05115 at 1183.090 kb on - strand, within CA264_05115 at 1183.194 kb on - strand, within CA264_05115 at 1183.198 kb on + strand, within CA264_05115 at 1183.241 kb on - strand, within CA264_05115 at 1183.243 kb on + strand, within CA264_05115 at 1183.333 kb on + strand, within CA264_05115 at 1183.333 kb on + strand, within CA264_05115 at 1183.362 kb on - strand, within CA264_05115 at 1183.364 kb on - strand, within CA264_05115 at 1183.364 kb on - strand, within CA264_05115 at 1183.364 kb on - strand, within CA264_05115 at 1183.474 kb on + strand, within CA264_05115 at 1183.474 kb on + strand, within CA264_05115 at 1183.475 kb on - strand, within CA264_05115 at 1183.475 kb on - strand, within CA264_05115 at 1183.475 kb on - strand, within CA264_05115 at 1183.531 kb on - strand, within CA264_05115 at 1183.612 kb on - strand at 1183.642 kb on + strand at 1183.642 kb on + strand at 1183.643 kb on - strand at 1183.648 kb on + strand at 1183.665 kb on + strand at 1183.671 kb on + strand at 1183.835 kb on + strand, within CA264_05120 at 1183.836 kb on - strand, within CA264_05120 at 1183.836 kb on - strand, within CA264_05120 at 1183.837 kb on + strand, within CA264_05120 at 1183.838 kb on - strand, within CA264_05120 at 1183.847 kb on + strand, within CA264_05120 at 1183.890 kb on + strand, within CA264_05120 at 1183.915 kb on + strand, within CA264_05120 at 1183.916 kb on - strand, within CA264_05120 at 1184.010 kb on + strand, within CA264_05120 at 1184.029 kb on + strand, within CA264_05120 at 1184.029 kb on + strand, within CA264_05120 at 1184.029 kb on + strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.030 kb on - strand, within CA264_05120 at 1184.084 kb on - strand, within CA264_05120 at 1184.142 kb on - strand, within CA264_05120 at 1184.144 kb on + strand, within CA264_05120 at 1184.144 kb on + strand, within CA264_05120 at 1184.146 kb on + strand, within CA264_05120 at 1184.216 kb on + strand, within CA264_05120 at 1184.216 kb on + strand, within CA264_05120 at 1184.217 kb on - strand, within CA264_05120 at 1184.228 kb on + strand, within CA264_05120 at 1184.230 kb on + strand, within CA264_05120 at 1184.305 kb on + strand, within CA264_05120 at 1184.423 kb on + strand, within CA264_05120 at 1184.423 kb on + strand, within CA264_05120 at 1184.441 kb on - strand, within CA264_05120 at 1184.450 kb on + strand at 1184.451 kb on - strand at 1184.454 kb on + strand at 1184.561 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 1,182,044 + CA264_05105 0.81 -1.0 1,182,069 - CA264_05105 0.85 -0.5 1,182,096 - CA264_05105 0.89 -0.1 1,182,101 + CA264_05105 0.89 -1.3 1,182,102 - CA264_05105 0.89 -1.8 1,182,102 - CA264_05105 0.89 -0.3 1,182,112 - -0.5 1,182,112 - -1.5 1,182,115 - -0.1 1,182,130 + -0.6 1,182,131 - -1.5 1,182,131 - -0.7 1,182,131 - -0.3 1,182,150 - -0.0 1,182,223 + -0.5 1,182,224 - -0.7 1,182,286 - CA264_05110 0.15 -0.5 1,182,286 - CA264_05110 0.15 -0.1 1,182,336 - CA264_05110 0.22 -0.3 1,182,347 + CA264_05110 0.23 -0.3 1,182,508 + CA264_05110 0.44 -0.9 1,182,592 + CA264_05110 0.55 -0.9 1,182,592 + CA264_05110 0.55 -0.6 1,182,594 + CA264_05110 0.56 -0.1 1,182,629 + CA264_05110 0.60 +0.4 1,182,630 - CA264_05110 0.60 -1.4 1,182,634 + CA264_05110 0.61 -1.1 1,182,634 + CA264_05110 0.61 -0.2 1,182,662 - CA264_05110 0.65 -1.4 1,182,728 + CA264_05110 0.73 +0.2 1,182,731 + CA264_05110 0.74 -1.5 1,182,816 - CA264_05110 0.85 -1.3 1,182,888 - -0.0 1,182,894 + -0.3 1,182,894 + -0.7 1,182,971 + +0.1 1,182,972 - -0.9 1,182,972 - -0.0 1,182,976 + +0.2 1,182,976 + +0.1 1,182,976 + -0.2 1,182,976 + -0.9 1,182,977 - -0.3 1,182,992 + +1.9 1,182,992 + +0.1 1,183,012 + -0.7 1,183,058 + +0.1 1,183,090 - CA264_05115 0.14 -0.0 1,183,090 - CA264_05115 0.14 +1.4 1,183,090 - CA264_05115 0.14 -0.1 1,183,194 - CA264_05115 0.31 -0.4 1,183,198 + CA264_05115 0.32 +0.5 1,183,241 - CA264_05115 0.39 -0.7 1,183,243 + CA264_05115 0.39 +0.3 1,183,333 + CA264_05115 0.54 +0.4 1,183,333 + CA264_05115 0.54 +0.1 1,183,362 - CA264_05115 0.59 +0.8 1,183,364 - CA264_05115 0.59 -0.8 1,183,364 - CA264_05115 0.59 -0.9 1,183,364 - CA264_05115 0.59 +1.8 1,183,474 + CA264_05115 0.77 +0.6 1,183,474 + CA264_05115 0.77 +0.6 1,183,475 - CA264_05115 0.77 -0.0 1,183,475 - CA264_05115 0.77 -0.1 1,183,475 - CA264_05115 0.77 +0.6 1,183,531 - CA264_05115 0.86 -0.6 1,183,612 - -0.1 1,183,642 + -0.4 1,183,642 + -1.4 1,183,643 - -0.4 1,183,648 + -0.6 1,183,665 + -0.4 1,183,671 + -0.5 1,183,835 + CA264_05120 0.19 -0.4 1,183,836 - CA264_05120 0.19 -1.9 1,183,836 - CA264_05120 0.19 +0.8 1,183,837 + CA264_05120 0.19 +0.2 1,183,838 - CA264_05120 0.19 -0.1 1,183,847 + CA264_05120 0.20 +1.0 1,183,890 + CA264_05120 0.25 -0.1 1,183,915 + CA264_05120 0.28 -0.6 1,183,916 - CA264_05120 0.28 +0.0 1,184,010 + CA264_05120 0.39 +0.3 1,184,029 + CA264_05120 0.41 -0.2 1,184,029 + CA264_05120 0.41 -0.3 1,184,029 + CA264_05120 0.41 -0.2 1,184,030 - CA264_05120 0.42 +0.2 1,184,030 - CA264_05120 0.42 -0.5 1,184,030 - CA264_05120 0.42 +0.3 1,184,030 - CA264_05120 0.42 -0.5 1,184,030 - CA264_05120 0.42 +0.3 1,184,030 - CA264_05120 0.42 -0.2 1,184,084 - CA264_05120 0.48 +0.6 1,184,142 - CA264_05120 0.54 -0.3 1,184,144 + CA264_05120 0.55 +0.6 1,184,144 + CA264_05120 0.55 +1.6 1,184,146 + CA264_05120 0.55 -0.0 1,184,216 + CA264_05120 0.63 +0.7 1,184,216 + CA264_05120 0.63 -0.2 1,184,217 - CA264_05120 0.63 +0.5 1,184,228 + CA264_05120 0.64 +0.5 1,184,230 + CA264_05120 0.65 +0.2 1,184,305 + CA264_05120 0.73 -0.0 1,184,423 + CA264_05120 0.87 -0.7 1,184,423 + CA264_05120 0.87 +0.1 1,184,441 - CA264_05120 0.89 -1.3 1,184,450 + -0.2 1,184,451 - +1.1 1,184,454 + +0.4 1,184,561 - +0.1
Or see this region's nucleotide sequence