Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04910

Experiment: m.b. Nickel (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04905 and CA264_04910 are separated by 212 nucleotidesCA264_04910 and CA264_04915 are separated by 105 nucleotidesCA264_04915 and CA264_04920 are separated by 76 nucleotides CA264_04905: CA264_04905 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,137,745 to 1,139,241 _04905 CA264_04910: CA264_04910 - 8-amino-7-oxononanoate synthase, at 1,139,454 to 1,140,692 _04910 CA264_04915: CA264_04915 - histone H1, at 1,140,798 to 1,140,992 _04915 CA264_04920: CA264_04920 - tyrosine--tRNA ligase, at 1,141,069 to 1,142,373 _04920 Position (kb) 1139 1140 1141Strain fitness (log2 ratio) -2 -1 0 1at 1138.494 kb on + strand, within CA264_04905at 1138.543 kb on + strand, within CA264_04905at 1138.543 kb on + strand, within CA264_04905at 1138.588 kb on - strand, within CA264_04905at 1138.631 kb on + strand, within CA264_04905at 1138.723 kb on + strand, within CA264_04905at 1138.724 kb on - strand, within CA264_04905at 1138.857 kb on + strand, within CA264_04905at 1138.859 kb on + strand, within CA264_04905at 1138.859 kb on + strand, within CA264_04905at 1138.930 kb on - strand, within CA264_04905at 1138.930 kb on - strand, within CA264_04905at 1138.934 kb on - strand, within CA264_04905at 1139.037 kb on + strand, within CA264_04905at 1139.057 kb on + strand, within CA264_04905at 1139.058 kb on - strand, within CA264_04905at 1139.073 kb on + strand, within CA264_04905at 1139.074 kb on - strandat 1139.083 kb on + strand, within CA264_04905at 1139.173 kb on - strandat 1139.221 kb on + strandat 1139.222 kb on - strandat 1139.250 kb on + strandat 1139.250 kb on + strandat 1139.251 kb on - strandat 1139.258 kb on - strandat 1139.329 kb on - strandat 1139.335 kb on + strandat 1139.335 kb on + strandat 1139.335 kb on + strandat 1139.336 kb on - strandat 1139.336 kb on - strandat 1139.345 kb on - strandat 1139.378 kb on + strandat 1139.379 kb on - strandat 1139.379 kb on - strandat 1139.380 kb on + strandat 1139.381 kb on - strandat 1139.381 kb on - strandat 1139.403 kb on + strandat 1140.709 kb on - strandat 1140.875 kb on + strand, within CA264_04915at 1141.009 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM
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1,138,494 + CA264_04905 0.50 +0.6
1,138,543 + CA264_04905 0.53 +0.4
1,138,543 + CA264_04905 0.53 +1.1
1,138,588 - CA264_04905 0.56 +0.2
1,138,631 + CA264_04905 0.59 -0.0
1,138,723 + CA264_04905 0.65 +0.7
1,138,724 - CA264_04905 0.65 +0.3
1,138,857 + CA264_04905 0.74 +0.9
1,138,859 + CA264_04905 0.74 +0.0
1,138,859 + CA264_04905 0.74 -0.2
1,138,930 - CA264_04905 0.79 +0.6
1,138,930 - CA264_04905 0.79 +0.6
1,138,934 - CA264_04905 0.79 +0.4
1,139,037 + CA264_04905 0.86 +0.0
1,139,057 + CA264_04905 0.88 +0.6
1,139,058 - CA264_04905 0.88 +1.1
1,139,073 + CA264_04905 0.89 -1.6
1,139,074 - +1.1
1,139,083 + CA264_04905 0.89 +1.0
1,139,173 - +0.5
1,139,221 + +0.6
1,139,222 - +0.5
1,139,250 + +0.6
1,139,250 + -0.1
1,139,251 - -0.1
1,139,258 - +0.5
1,139,329 - +0.7
1,139,335 + -0.6
1,139,335 + +0.7
1,139,335 + +0.2
1,139,336 - -0.8
1,139,336 - -0.1
1,139,345 - +0.5
1,139,378 + -0.0
1,139,379 - +0.3
1,139,379 - -2.0
1,139,380 + +0.3
1,139,381 - +0.3
1,139,381 - +0.1
1,139,403 + +0.3
1,140,709 - -0.4
1,140,875 + CA264_04915 0.39 +0.6
1,141,009 + +1.6

Or see this region's nucleotide sequence