Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02100 and CA264_02105 are separated by 119 nucleotides CA264_02105 and CA264_02110 are separated by 257 nucleotides CA264_02110 and CA264_02115 are separated by 83 nucleotides CA264_02115 and CA264_02120 are separated by 78 nucleotides
CA264_02100: CA264_02100 - Clp protease ClpC, at 484,427 to 487,024
_02100
CA264_02105: CA264_02105 - hypothetical protein, at 487,144 to 487,746
_02105
CA264_02110: CA264_02110 - lauroyl acyltransferase, at 488,004 to 488,924
_02110
CA264_02115: CA264_02115 - threonylcarbamoyl-AMP synthase, at 489,008 to 489,634
_02115
CA264_02120: CA264_02120 - GNAT family N-acetyltransferase, at 489,713 to 490,270
_02120
Position (kb) 488
489 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 487.027 kb on - strand at 487.027 kb on - strand at 487.028 kb on + strand at 487.029 kb on - strand at 487.031 kb on + strand at 487.031 kb on + strand at 487.031 kb on + strand at 487.032 kb on - strand at 487.033 kb on + strand at 487.034 kb on - strand at 487.042 kb on + strand at 487.110 kb on + strand at 487.179 kb on + strand at 487.228 kb on + strand, within CA264_02105 at 487.236 kb on + strand, within CA264_02105 at 487.236 kb on + strand, within CA264_02105 at 487.279 kb on + strand, within CA264_02105 at 487.279 kb on + strand, within CA264_02105 at 487.280 kb on - strand, within CA264_02105 at 487.369 kb on - strand, within CA264_02105 at 487.374 kb on - strand, within CA264_02105 at 487.374 kb on - strand, within CA264_02105 at 487.427 kb on + strand, within CA264_02105 at 487.442 kb on + strand, within CA264_02105 at 487.443 kb on - strand, within CA264_02105 at 487.463 kb on + strand, within CA264_02105 at 487.526 kb on + strand, within CA264_02105 at 487.526 kb on + strand, within CA264_02105 at 487.566 kb on + strand, within CA264_02105 at 487.600 kb on + strand, within CA264_02105 at 487.652 kb on + strand, within CA264_02105 at 487.724 kb on + strand at 487.724 kb on + strand at 487.781 kb on + strand at 487.781 kb on + strand at 487.784 kb on + strand at 487.864 kb on - strand at 487.868 kb on - strand at 487.922 kb on + strand at 487.947 kb on + strand at 487.978 kb on + strand at 487.978 kb on + strand at 487.979 kb on - strand at 488.023 kb on + strand at 488.024 kb on - strand at 488.090 kb on - strand at 488.362 kb on + strand, within CA264_02110 at 488.937 kb on - strand at 488.970 kb on + strand at 488.989 kb on - strand at 488.994 kb on + strand at 489.168 kb on + strand, within CA264_02115 at 489.268 kb on + strand, within CA264_02115 at 489.335 kb on - strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.369 kb on + strand, within CA264_02115 at 489.461 kb on + strand, within CA264_02115 at 489.461 kb on + strand, within CA264_02115 at 489.517 kb on - strand, within CA264_02115 at 489.517 kb on - strand, within CA264_02115 at 489.640 kb on + strand at 489.640 kb on + strand at 489.641 kb on - strand at 489.658 kb on + strand at 489.658 kb on + strand at 489.658 kb on + strand at 489.659 kb on - strand at 489.659 kb on - strand at 489.659 kb on - strand at 489.664 kb on - strand at 489.664 kb on - strand at 489.669 kb on + strand at 489.795 kb on - strand, within CA264_02120 at 489.795 kb on - strand, within CA264_02120 at 489.863 kb on + strand, within CA264_02120 at 489.864 kb on - strand, within CA264_02120 at 489.869 kb on + strand, within CA264_02120 at 489.900 kb on + strand, within CA264_02120 at 489.900 kb on + strand, within CA264_02120 at 489.901 kb on - strand, within CA264_02120 at 489.901 kb on - strand, within CA264_02120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 487,027 - +0.7 487,027 - +0.3 487,028 + -0.2 487,029 - -0.6 487,031 + +1.4 487,031 + +0.6 487,031 + +0.2 487,032 - +0.4 487,033 + +2.0 487,034 - -0.7 487,042 + +0.3 487,110 + -2.3 487,179 + -1.2 487,228 + CA264_02105 0.14 -1.4 487,236 + CA264_02105 0.15 -0.7 487,236 + CA264_02105 0.15 -0.6 487,279 + CA264_02105 0.22 -1.1 487,279 + CA264_02105 0.22 -1.5 487,280 - CA264_02105 0.23 -1.2 487,369 - CA264_02105 0.37 -0.5 487,374 - CA264_02105 0.38 -1.1 487,374 - CA264_02105 0.38 -1.5 487,427 + CA264_02105 0.47 +0.0 487,442 + CA264_02105 0.49 -2.0 487,443 - CA264_02105 0.50 -1.2 487,463 + CA264_02105 0.53 -1.4 487,526 + CA264_02105 0.63 +0.4 487,526 + CA264_02105 0.63 -1.8 487,566 + CA264_02105 0.70 -0.3 487,600 + CA264_02105 0.76 -1.5 487,652 + CA264_02105 0.84 -0.6 487,724 + -0.2 487,724 + -1.2 487,781 + +1.0 487,781 + -0.9 487,784 + +0.0 487,864 - -0.7 487,868 - -0.8 487,922 + +0.5 487,947 + +0.3 487,978 + -0.5 487,978 + -0.3 487,979 - -1.5 488,023 + -0.6 488,024 - -2.8 488,090 - -2.2 488,362 + CA264_02110 0.39 -1.3 488,937 - -1.2 488,970 + +0.5 488,989 - -0.3 488,994 + -1.5 489,168 + CA264_02115 0.26 +0.4 489,268 + CA264_02115 0.41 +0.3 489,335 - CA264_02115 0.52 +0.4 489,369 + CA264_02115 0.58 +0.6 489,369 + CA264_02115 0.58 -0.4 489,369 + CA264_02115 0.58 -0.4 489,461 + CA264_02115 0.72 +1.0 489,461 + CA264_02115 0.72 -0.3 489,517 - CA264_02115 0.81 -1.3 489,517 - CA264_02115 0.81 +0.8 489,640 + +0.6 489,640 + -0.3 489,641 - -1.2 489,658 + +0.5 489,658 + -0.4 489,658 + +0.1 489,659 - -1.2 489,659 - -1.1 489,659 - -0.6 489,664 - -0.3 489,664 - -2.1 489,669 + +0.7 489,795 - CA264_02120 0.15 +1.2 489,795 - CA264_02120 0.15 -0.4 489,863 + CA264_02120 0.27 -0.9 489,864 - CA264_02120 0.27 -0.5 489,869 + CA264_02120 0.28 -1.2 489,900 + CA264_02120 0.34 -0.0 489,900 + CA264_02120 0.34 +1.1 489,901 - CA264_02120 0.34 +0.2 489,901 - CA264_02120 0.34 -0.5
Or see this region's nucleotide sequence