Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02005 and CA264_02010 are separated by 158 nucleotides CA264_02010 and CA264_02015 are separated by 161 nucleotides CA264_02015 and CA264_02020 are separated by 144 nucleotides
CA264_02005: CA264_02005 - 23S rRNA (uracil-5-)-methyltransferase RumA, at 461,546 to 462,958
_02005
CA264_02010: CA264_02010 - hypothetical protein, at 463,117 to 463,485
_02010
CA264_02015: CA264_02015 - thiamine-phosphate kinase, at 463,647 to 464,672
_02015
CA264_02020: CA264_02020 - histidinol-phosphate transaminase, at 464,817 to 466,964
_02020
Position (kb)
463
464
465 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 462.672 kb on - strand, within CA264_02005 at 462.876 kb on - strand at 462.876 kb on - strand at 462.882 kb on + strand at 462.937 kb on - strand at 462.937 kb on - strand at 462.939 kb on + strand at 462.939 kb on + strand at 462.940 kb on - strand at 462.940 kb on - strand at 462.940 kb on - strand at 462.952 kb on + strand at 462.952 kb on + strand at 462.953 kb on - strand at 462.956 kb on + strand at 462.956 kb on + strand at 462.956 kb on + strand at 462.957 kb on - strand at 462.977 kb on - strand at 462.977 kb on - strand at 463.037 kb on - strand at 463.037 kb on - strand at 463.096 kb on + strand at 463.097 kb on - strand at 463.143 kb on + strand at 463.320 kb on + strand, within CA264_02010 at 463.323 kb on + strand, within CA264_02010 at 463.324 kb on - strand, within CA264_02010 at 463.324 kb on - strand, within CA264_02010 at 463.334 kb on - strand, within CA264_02010 at 463.348 kb on - strand, within CA264_02010 at 463.349 kb on + strand, within CA264_02010 at 463.389 kb on + strand, within CA264_02010 at 463.390 kb on - strand, within CA264_02010 at 463.400 kb on - strand, within CA264_02010 at 463.401 kb on + strand, within CA264_02010 at 463.465 kb on - strand at 463.505 kb on - strand at 463.515 kb on + strand at 463.516 kb on - strand at 463.537 kb on + strand at 463.537 kb on + strand at 463.541 kb on + strand at 463.542 kb on - strand at 463.542 kb on - strand at 463.561 kb on - strand at 463.561 kb on - strand at 463.563 kb on + strand at 463.563 kb on + strand at 463.564 kb on - strand at 463.564 kb on - strand at 463.564 kb on - strand at 463.603 kb on + strand at 463.611 kb on + strand at 463.611 kb on + strand at 463.612 kb on - strand at 463.622 kb on - strand at 463.622 kb on - strand at 463.631 kb on + strand at 464.672 kb on + strand at 464.676 kb on + strand at 464.677 kb on - strand at 464.677 kb on - strand at 464.793 kb on + strand at 464.819 kb on - strand at 464.819 kb on - strand at 464.925 kb on + strand at 464.925 kb on + strand at 465.082 kb on - strand, within CA264_02020 at 465.140 kb on - strand, within CA264_02020 at 465.140 kb on - strand, within CA264_02020 at 465.366 kb on + strand, within CA264_02020 at 465.366 kb on + strand, within CA264_02020 at 465.367 kb on - strand, within CA264_02020 at 465.398 kb on - strand, within CA264_02020 at 465.435 kb on + strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.510 kb on - strand, within CA264_02020 at 465.592 kb on - strand, within CA264_02020 at 465.600 kb on + strand, within CA264_02020
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 462,672 - CA264_02005 0.80 -1.2 462,876 - +1.9 462,876 - -0.9 462,882 + -0.6 462,937 - -0.6 462,937 - +0.0 462,939 + +1.4 462,939 + -0.5 462,940 - +0.1 462,940 - -2.5 462,940 - +0.2 462,952 + -0.4 462,952 + -0.3 462,953 - -0.6 462,956 + +1.4 462,956 + -0.1 462,956 + -0.8 462,957 - -2.2 462,977 - -0.2 462,977 - -0.3 463,037 - -0.9 463,037 - -0.5 463,096 + -2.1 463,097 - +0.6 463,143 + +0.0 463,320 + CA264_02010 0.55 -0.7 463,323 + CA264_02010 0.56 -0.7 463,324 - CA264_02010 0.56 -0.5 463,324 - CA264_02010 0.56 -0.7 463,334 - CA264_02010 0.59 -0.5 463,348 - CA264_02010 0.63 -0.8 463,349 + CA264_02010 0.63 -0.6 463,389 + CA264_02010 0.74 -0.7 463,390 - CA264_02010 0.74 -0.4 463,400 - CA264_02010 0.77 -0.9 463,401 + CA264_02010 0.77 -1.5 463,465 - +0.7 463,505 - -0.8 463,515 + -0.0 463,516 - +0.2 463,537 + -1.0 463,537 + -0.1 463,541 + -0.0 463,542 - -0.7 463,542 - -0.7 463,561 - -0.3 463,561 - -1.1 463,563 + +0.5 463,563 + +0.7 463,564 - -0.7 463,564 - -0.7 463,564 - -1.7 463,603 + -0.3 463,611 + -0.2 463,611 + -0.3 463,612 - +0.5 463,622 - -0.1 463,622 - +1.1 463,631 + +0.1 464,672 + +2.7 464,676 + -1.4 464,677 - -0.3 464,677 - +1.8 464,793 + -0.6 464,819 - +0.3 464,819 - +0.1 464,925 + +0.6 464,925 + +0.2 465,082 - CA264_02020 0.12 -0.4 465,140 - CA264_02020 0.15 +0.2 465,140 - CA264_02020 0.15 -0.0 465,366 + CA264_02020 0.26 -0.1 465,366 + CA264_02020 0.26 -0.6 465,367 - CA264_02020 0.26 -0.1 465,398 - CA264_02020 0.27 -1.2 465,435 + CA264_02020 0.29 -0.7 465,436 - CA264_02020 0.29 -0.1 465,436 - CA264_02020 0.29 -1.1 465,436 - CA264_02020 0.29 +0.2 465,510 - CA264_02020 0.32 -0.0 465,592 - CA264_02020 0.36 +0.3 465,600 + CA264_02020 0.36 +0.1
Or see this region's nucleotide sequence