Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01990 and CA264_01995 are separated by 73 nucleotides CA264_01995 and CA264_02000 are separated by 104 nucleotides CA264_02000 and CA264_02005 are separated by 150 nucleotides
CA264_01990: CA264_01990 - tRNA-Lys, at 459,595 to 459,670
_01990
CA264_01995: CA264_01995 - SH3 domain-containing protein, at 459,744 to 460,481
_01995
CA264_02000: CA264_02000 - short chain dehydrogenase, at 460,586 to 461,395
_02000
CA264_02005: CA264_02005 - 23S rRNA (uracil-5-)-methyltransferase RumA, at 461,546 to 462,958
_02005
Position (kb) 460
461
462 Strain fitness (log2 ratio) -2
-1
0
1 at 459.635 kb on - strand, within CA264_01990 at 459.643 kb on - strand, within CA264_01990 at 459.683 kb on - strand at 459.842 kb on + strand, within CA264_01995 at 459.894 kb on + strand, within CA264_01995 at 459.895 kb on - strand, within CA264_01995 at 459.954 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.996 kb on + strand, within CA264_01995 at 460.011 kb on + strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.089 kb on + strand, within CA264_01995 at 460.090 kb on - strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.184 kb on + strand, within CA264_01995 at 460.184 kb on + strand, within CA264_01995 at 460.191 kb on - strand, within CA264_01995 at 460.242 kb on - strand, within CA264_01995 at 460.283 kb on - strand, within CA264_01995 at 460.446 kb on + strand at 460.447 kb on - strand at 460.447 kb on - strand at 460.489 kb on + strand at 460.587 kb on + strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 460.588 kb on - strand at 461.481 kb on + strand at 461.481 kb on + strand at 461.481 kb on + strand at 461.482 kb on - strand at 461.482 kb on - strand at 461.484 kb on - strand at 461.484 kb on - strand at 461.514 kb on - strand at 461.554 kb on + strand at 461.652 kb on + strand at 461.806 kb on + strand, within CA264_02005 at 461.806 kb on + strand, within CA264_02005 at 461.807 kb on - strand, within CA264_02005 at 461.807 kb on - strand, within CA264_02005 at 461.959 kb on + strand, within CA264_02005 at 462.058 kb on + strand, within CA264_02005 at 462.084 kb on - strand, within CA264_02005 at 462.182 kb on + strand, within CA264_02005 at 462.184 kb on + strand, within CA264_02005 at 462.212 kb on - strand, within CA264_02005 at 462.245 kb on + strand, within CA264_02005 at 462.245 kb on + strand, within CA264_02005 at 462.379 kb on + strand, within CA264_02005 at 462.392 kb on + strand, within CA264_02005 at 462.393 kb on - strand, within CA264_02005 at 462.393 kb on - strand, within CA264_02005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 459,635 - CA264_01990 0.53 -0.5 459,643 - CA264_01990 0.63 -0.2 459,683 - -0.6 459,842 + CA264_01995 0.13 -0.7 459,894 + CA264_01995 0.20 -1.0 459,895 - CA264_01995 0.20 +0.4 459,954 + CA264_01995 0.28 -0.6 459,993 + CA264_01995 0.34 -2.1 459,993 + CA264_01995 0.34 -0.2 459,996 + CA264_01995 0.34 -0.8 460,011 + CA264_01995 0.36 -0.4 460,012 - CA264_01995 0.36 -1.8 460,012 - CA264_01995 0.36 -0.8 460,075 + CA264_01995 0.45 -0.2 460,075 + CA264_01995 0.45 +0.7 460,089 + CA264_01995 0.47 -0.5 460,090 - CA264_01995 0.47 +0.0 460,131 + CA264_01995 0.52 -0.6 460,131 + CA264_01995 0.52 -0.9 460,131 + CA264_01995 0.52 -0.5 460,131 + CA264_01995 0.52 -0.3 460,132 - CA264_01995 0.53 -1.2 460,132 - CA264_01995 0.53 -0.3 460,132 - CA264_01995 0.53 -0.8 460,184 + CA264_01995 0.60 -0.1 460,184 + CA264_01995 0.60 -0.8 460,191 - CA264_01995 0.61 -0.2 460,242 - CA264_01995 0.67 -0.6 460,283 - CA264_01995 0.73 -2.5 460,446 + -0.1 460,447 - -0.8 460,447 - -0.7 460,489 + -1.3 460,587 + -0.2 460,588 - -1.9 460,588 - +0.5 460,588 - +1.0 460,588 - -0.3 460,588 - +0.9 461,481 + -1.5 461,481 + -0.2 461,481 + -0.4 461,482 - +0.4 461,482 - -0.1 461,484 - -0.5 461,484 - -0.8 461,514 - +0.9 461,554 + +0.2 461,652 + +0.2 461,806 + CA264_02005 0.18 -0.0 461,806 + CA264_02005 0.18 +1.1 461,807 - CA264_02005 0.18 -0.9 461,807 - CA264_02005 0.18 -1.9 461,959 + CA264_02005 0.29 -0.5 462,058 + CA264_02005 0.36 +0.1 462,084 - CA264_02005 0.38 +1.0 462,182 + CA264_02005 0.45 -1.0 462,184 + CA264_02005 0.45 +0.1 462,212 - CA264_02005 0.47 +0.2 462,245 + CA264_02005 0.49 -0.2 462,245 + CA264_02005 0.49 +1.7 462,379 + CA264_02005 0.59 -0.2 462,392 + CA264_02005 0.60 -0.3 462,393 - CA264_02005 0.60 -1.2 462,393 - CA264_02005 0.60 +0.0
Or see this region's nucleotide sequence