Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01390 and CA264_01395 are separated by 0 nucleotides CA264_01395 and CA264_01400 are separated by 73 nucleotides CA264_01400 and CA264_01405 are separated by 401 nucleotides
CA264_01390: CA264_01390 - iron ABC transporter permease, at 331,869 to 332,876
_01390
CA264_01395: CA264_01395 - 6-carboxytetrahydropterin synthase QueD, at 332,877 to 333,299
_01395
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
CA264_01405: CA264_01405 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 334,896 to 336,119
_01405
Position (kb) 333
334
335 Strain fitness (log2 ratio) -1
0
1
2
3 at 332.527 kb on + strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.660 kb on + strand, within CA264_01390 at 332.741 kb on + strand, within CA264_01390 at 332.807 kb on - strand at 332.836 kb on + strand at 332.874 kb on + strand at 332.954 kb on + strand, within CA264_01395 at 333.003 kb on + strand, within CA264_01395 at 333.004 kb on - strand, within CA264_01395 at 333.116 kb on + strand, within CA264_01395 at 333.259 kb on - strand at 333.281 kb on - strand at 333.285 kb on + strand at 333.298 kb on - strand at 333.321 kb on + strand at 333.334 kb on + strand at 333.344 kb on + strand at 334.490 kb on + strand at 334.490 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.578 kb on - strand at 334.604 kb on + strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.710 kb on + strand at 334.776 kb on - strand at 334.776 kb on - strand at 334.795 kb on - strand at 334.799 kb on + strand at 334.849 kb on - strand at 334.855 kb on + strand at 334.856 kb on - strand at 334.918 kb on - strand at 334.949 kb on - strand at 334.962 kb on - strand at 335.031 kb on - strand, within CA264_01405 at 335.142 kb on - strand, within CA264_01405 at 335.144 kb on - strand, within CA264_01405 at 335.328 kb on - strand, within CA264_01405 at 335.479 kb on - strand, within CA264_01405
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 332,527 + CA264_01390 0.65 +2.8 332,527 + CA264_01390 0.65 +1.8 332,528 - CA264_01390 0.65 +2.0 332,528 - CA264_01390 0.65 +2.1 332,660 + CA264_01390 0.78 +1.9 332,741 + CA264_01390 0.87 +1.3 332,807 - +2.2 332,836 + +0.4 332,874 + -0.2 332,954 + CA264_01395 0.18 +0.3 333,003 + CA264_01395 0.30 +0.1 333,004 - CA264_01395 0.30 -0.1 333,116 + CA264_01395 0.57 +0.1 333,259 - -0.5 333,281 - -0.2 333,285 + +0.3 333,298 - -0.0 333,321 + +0.0 333,334 + -0.4 333,344 + +0.1 334,490 + -0.4 334,490 + -0.2 334,492 + -0.2 334,492 + +0.0 334,492 + -1.3 334,578 - -0.5 334,604 + +0.3 334,708 - +0.0 334,708 - -0.6 334,708 - -0.1 334,710 + -0.1 334,776 - -0.9 334,776 - +0.2 334,795 - -1.7 334,799 + +0.4 334,849 - -1.0 334,855 + -1.3 334,856 - +1.0 334,918 - -0.1 334,949 - -0.5 334,962 - -0.3 335,031 - CA264_01405 0.11 +0.3 335,142 - CA264_01405 0.20 -0.4 335,144 - CA264_01405 0.20 +0.0 335,328 - CA264_01405 0.35 -0.4 335,479 - CA264_01405 0.48 -0.1
Or see this region's nucleotide sequence