Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00810 and CA264_00815 are separated by 76 nucleotides CA264_00815 and CA264_00820 are separated by 129 nucleotides CA264_00820 and CA264_00825 are separated by 800 nucleotides
CA264_00810: CA264_00810 - phospholipase, at 173,154 to 173,813
_00810
CA264_00815: CA264_00815 - cytidine deaminase, at 173,890 to 174,372
_00815
CA264_00820: CA264_00820 - saccharopine dehydrogenase, at 174,502 to 175,851
_00820
CA264_00825: CA264_00825 - methyltransferase, at 176,652 to 177,368
_00825
Position (kb) 174
175
176 Strain fitness (log2 ratio) -2
-1
0
1
2 at 173.523 kb on + strand, within CA264_00810 at 173.695 kb on + strand, within CA264_00810 at 173.770 kb on + strand at 173.773 kb on + strand at 173.783 kb on + strand at 173.830 kb on + strand at 173.881 kb on + strand at 173.881 kb on + strand at 173.891 kb on + strand at 173.940 kb on + strand, within CA264_00815 at 174.000 kb on + strand, within CA264_00815 at 174.009 kb on - strand, within CA264_00815 at 174.019 kb on + strand, within CA264_00815 at 174.020 kb on - strand, within CA264_00815 at 174.260 kb on + strand, within CA264_00815 at 174.346 kb on - strand at 174.446 kb on - strand at 174.478 kb on - strand at 174.501 kb on + strand at 174.557 kb on - strand at 174.557 kb on - strand at 174.590 kb on - strand at 174.805 kb on + strand, within CA264_00820 at 174.806 kb on - strand, within CA264_00820 at 174.806 kb on - strand, within CA264_00820 at 174.809 kb on + strand, within CA264_00820 at 174.927 kb on + strand, within CA264_00820 at 174.960 kb on + strand, within CA264_00820 at 175.015 kb on + strand, within CA264_00820 at 175.023 kb on + strand, within CA264_00820 at 175.023 kb on + strand, within CA264_00820 at 175.043 kb on + strand, within CA264_00820 at 175.072 kb on + strand, within CA264_00820 at 175.078 kb on - strand, within CA264_00820 at 175.078 kb on - strand, within CA264_00820 at 175.078 kb on - strand, within CA264_00820 at 175.090 kb on + strand, within CA264_00820 at 175.091 kb on - strand, within CA264_00820 at 175.091 kb on - strand, within CA264_00820 at 175.096 kb on + strand, within CA264_00820 at 175.096 kb on + strand, within CA264_00820 at 175.096 kb on + strand, within CA264_00820 at 175.096 kb on + strand, within CA264_00820 at 175.096 kb on + strand, within CA264_00820 at 175.097 kb on - strand, within CA264_00820 at 175.097 kb on - strand, within CA264_00820 at 175.097 kb on - strand, within CA264_00820 at 175.097 kb on - strand, within CA264_00820 at 175.097 kb on - strand, within CA264_00820 at 175.309 kb on + strand, within CA264_00820 at 175.309 kb on + strand, within CA264_00820 at 175.309 kb on + strand, within CA264_00820 at 175.310 kb on - strand, within CA264_00820 at 175.353 kb on - strand, within CA264_00820 at 175.407 kb on + strand, within CA264_00820 at 175.408 kb on - strand, within CA264_00820 at 175.415 kb on - strand, within CA264_00820 at 175.625 kb on + strand, within CA264_00820 at 175.626 kb on - strand, within CA264_00820 at 175.632 kb on + strand, within CA264_00820 at 175.632 kb on + strand, within CA264_00820 at 175.722 kb on - strand at 175.758 kb on + strand at 175.762 kb on + strand at 175.775 kb on - strand at 175.775 kb on - strand at 175.775 kb on - strand at 175.810 kb on - strand at 175.836 kb on - strand at 175.856 kb on - strand at 175.856 kb on - strand at 175.907 kb on - strand at 175.915 kb on + strand at 175.916 kb on - strand at 175.916 kb on - strand at 175.943 kb on + strand at 175.944 kb on - strand at 175.955 kb on + strand at 175.978 kb on + strand at 176.033 kb on + strand at 176.033 kb on + strand at 176.121 kb on + strand at 176.122 kb on - strand at 176.122 kb on - strand at 176.123 kb on + strand at 176.123 kb on + strand at 176.123 kb on + strand at 176.123 kb on + strand at 176.124 kb on - strand at 176.124 kb on - strand at 176.141 kb on + strand at 176.142 kb on - strand at 176.142 kb on - strand at 176.180 kb on + strand at 176.186 kb on + strand at 176.186 kb on + strand at 176.186 kb on + strand at 176.186 kb on + strand at 176.190 kb on + strand at 176.257 kb on - strand at 176.257 kb on - strand at 176.264 kb on + strand at 176.265 kb on - strand at 176.277 kb on + strand at 176.280 kb on + strand at 176.281 kb on - strand at 176.284 kb on + strand at 176.284 kb on + strand at 176.284 kb on + strand at 176.285 kb on - strand at 176.285 kb on - strand at 176.285 kb on - strand at 176.285 kb on - strand at 176.289 kb on + strand at 176.289 kb on + strand at 176.290 kb on - strand at 176.290 kb on - strand at 176.290 kb on - strand at 176.291 kb on + strand at 176.291 kb on + strand at 176.292 kb on - strand at 176.292 kb on - strand at 176.292 kb on - strand at 176.292 kb on - strand at 176.311 kb on + strand at 176.370 kb on + strand at 176.429 kb on - strand at 176.429 kb on - strand at 176.437 kb on - strand at 176.437 kb on - strand at 176.492 kb on + strand at 176.522 kb on + strand at 176.525 kb on + strand at 176.525 kb on + strand at 176.525 kb on + strand at 176.526 kb on - strand at 176.529 kb on + strand at 176.530 kb on - strand at 176.633 kb on + strand at 176.665 kb on + strand at 176.666 kb on - strand at 176.666 kb on - strand at 176.666 kb on - strand at 176.666 kb on - strand at 176.668 kb on + strand at 176.699 kb on + strand at 176.699 kb on + strand at 176.700 kb on - strand at 176.701 kb on + strand at 176.701 kb on + strand at 176.702 kb on - strand at 176.729 kb on - strand, within CA264_00825 at 176.729 kb on - strand, within CA264_00825 at 176.729 kb on - strand, within CA264_00825 at 176.838 kb on + strand, within CA264_00825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 173,523 + CA264_00810 0.56 -0.5 173,695 + CA264_00810 0.82 +0.6 173,770 + +0.2 173,773 + +0.5 173,783 + -1.6 173,830 + -0.7 173,881 + +0.2 173,881 + -0.2 173,891 + -1.0 173,940 + CA264_00815 0.10 +0.4 174,000 + CA264_00815 0.23 -0.9 174,009 - CA264_00815 0.25 -0.2 174,019 + CA264_00815 0.27 -0.6 174,020 - CA264_00815 0.27 +0.4 174,260 + CA264_00815 0.77 -0.5 174,346 - +0.1 174,446 - +0.5 174,478 - -0.1 174,501 + -1.1 174,557 - -1.1 174,557 - -0.3 174,590 - -0.5 174,805 + CA264_00820 0.22 -0.1 174,806 - CA264_00820 0.23 -1.8 174,806 - CA264_00820 0.23 -0.5 174,809 + CA264_00820 0.23 +0.5 174,927 + CA264_00820 0.31 -1.2 174,960 + CA264_00820 0.34 -0.2 175,015 + CA264_00820 0.38 -0.6 175,023 + CA264_00820 0.39 -1.1 175,023 + CA264_00820 0.39 -0.3 175,043 + CA264_00820 0.40 -0.1 175,072 + CA264_00820 0.42 +1.0 175,078 - CA264_00820 0.43 -0.2 175,078 - CA264_00820 0.43 -0.0 175,078 - CA264_00820 0.43 -0.2 175,090 + CA264_00820 0.44 +0.6 175,091 - CA264_00820 0.44 -0.1 175,091 - CA264_00820 0.44 -0.4 175,096 + CA264_00820 0.44 -0.1 175,096 + CA264_00820 0.44 +0.3 175,096 + CA264_00820 0.44 -0.9 175,096 + CA264_00820 0.44 -0.0 175,096 + CA264_00820 0.44 +0.9 175,097 - CA264_00820 0.44 -0.5 175,097 - CA264_00820 0.44 -0.8 175,097 - CA264_00820 0.44 -0.6 175,097 - CA264_00820 0.44 -0.3 175,097 - CA264_00820 0.44 -1.3 175,309 + CA264_00820 0.60 -0.3 175,309 + CA264_00820 0.60 +0.1 175,309 + CA264_00820 0.60 +0.3 175,310 - CA264_00820 0.60 +0.0 175,353 - CA264_00820 0.63 -1.3 175,407 + CA264_00820 0.67 -1.2 175,408 - CA264_00820 0.67 +0.3 175,415 - CA264_00820 0.68 +1.0 175,625 + CA264_00820 0.83 -0.4 175,626 - CA264_00820 0.83 -0.2 175,632 + CA264_00820 0.84 -2.1 175,632 + CA264_00820 0.84 -0.2 175,722 - -0.4 175,758 + -0.2 175,762 + +0.8 175,775 - +1.3 175,775 - -1.1 175,775 - -0.8 175,810 - -1.6 175,836 - -0.4 175,856 - -0.1 175,856 - -0.7 175,907 - -0.1 175,915 + -0.0 175,916 - -0.6 175,916 - -0.3 175,943 + +0.8 175,944 - -0.6 175,955 + +0.2 175,978 + -0.4 176,033 + +0.9 176,033 + +0.3 176,121 + -2.1 176,122 - +0.2 176,122 - +1.0 176,123 + +1.7 176,123 + -0.5 176,123 + -0.1 176,123 + +0.5 176,124 - -0.3 176,124 - +1.7 176,141 + -0.7 176,142 - -0.4 176,142 - +1.0 176,180 + +0.2 176,186 + -0.3 176,186 + -0.0 176,186 + +0.2 176,186 + +0.1 176,190 + -0.1 176,257 - +0.4 176,257 - -0.3 176,264 + -0.3 176,265 - +0.4 176,277 + -0.6 176,280 + +0.3 176,281 - -0.5 176,284 + -0.5 176,284 + +0.5 176,284 + -0.7 176,285 - -0.2 176,285 - -0.4 176,285 - -0.2 176,285 - -0.1 176,289 + +0.5 176,289 + +0.3 176,290 - -0.1 176,290 - +1.8 176,290 - -0.3 176,291 + +0.3 176,291 + -0.7 176,292 - +0.4 176,292 - -0.6 176,292 - -0.4 176,292 - -0.3 176,311 + -0.5 176,370 + +0.7 176,429 - -0.8 176,429 - +0.5 176,437 - -0.7 176,437 - -0.0 176,492 + -0.8 176,522 + -0.1 176,525 + -1.0 176,525 + +0.7 176,525 + -0.5 176,526 - -0.7 176,529 + +0.6 176,530 - -1.8 176,633 + +0.1 176,665 + +0.3 176,666 - -0.5 176,666 - -0.2 176,666 - -0.6 176,666 - +1.0 176,668 + -0.2 176,699 + -0.3 176,699 + -0.0 176,700 - +1.1 176,701 + -0.4 176,701 + -1.5 176,702 - -1.0 176,729 - CA264_00825 0.11 -0.4 176,729 - CA264_00825 0.11 +0.3 176,729 - CA264_00825 0.11 -0.6 176,838 + CA264_00825 0.26 +2.0
Or see this region's nucleotide sequence