Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00605 and CA264_00610 are separated by 80 nucleotides CA264_00610 and CA264_00615 are separated by 209 nucleotides CA264_00615 and CA264_00620 are separated by 92 nucleotides CA264_00620 and CA264_00625 are separated by 70 nucleotides
CA264_00605: CA264_00605 - hypothetical protein, at 134,143 to 134,367
_00605
CA264_00610: CA264_00610 - hypothetical protein, at 134,448 to 134,939
_00610
CA264_00615: CA264_00615 - F0F1 ATP synthase subunit beta, at 135,149 to 136,660
_00615
CA264_00620: CA264_00620 - ATP synthase F1 subunit epsilon, at 136,753 to 136,998
_00620
CA264_00625: CA264_00625 - serine hydrolase, at 137,069 to 138,664
_00625
Position (kb) 135
136
137 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 134.153 kb on + strand at 134.153 kb on + strand at 134.175 kb on + strand, within CA264_00605 at 134.216 kb on + strand, within CA264_00605 at 134.217 kb on - strand, within CA264_00605 at 134.219 kb on + strand, within CA264_00605 at 134.219 kb on + strand, within CA264_00605 at 134.220 kb on - strand, within CA264_00605 at 134.242 kb on - strand, within CA264_00605 at 134.262 kb on + strand, within CA264_00605 at 134.262 kb on + strand, within CA264_00605 at 134.311 kb on - strand, within CA264_00605 at 134.320 kb on + strand, within CA264_00605 at 134.321 kb on - strand, within CA264_00605 at 134.321 kb on - strand, within CA264_00605 at 134.363 kb on + strand at 134.364 kb on - strand at 134.364 kb on - strand at 134.414 kb on + strand at 134.414 kb on + strand at 134.421 kb on + strand at 134.435 kb on - strand at 134.442 kb on - strand at 134.447 kb on + strand at 134.448 kb on - strand at 134.455 kb on - strand at 134.461 kb on - strand at 134.691 kb on + strand, within CA264_00610 at 134.759 kb on - strand, within CA264_00610 at 134.793 kb on + strand, within CA264_00610 at 134.794 kb on - strand, within CA264_00610 at 134.843 kb on + strand, within CA264_00610 at 134.887 kb on + strand, within CA264_00610 at 134.888 kb on - strand, within CA264_00610 at 134.938 kb on - strand at 134.991 kb on - strand at 135.066 kb on + strand at 135.075 kb on + strand at 135.075 kb on + strand at 135.075 kb on + strand at 135.077 kb on + strand at 135.122 kb on + strand at 135.122 kb on + strand at 136.672 kb on + strand at 136.997 kb on - strand at 137.014 kb on + strand at 137.017 kb on - strand at 137.196 kb on + strand at 137.196 kb on + strand at 137.196 kb on + strand at 137.299 kb on + strand, within CA264_00625 at 137.332 kb on - strand, within CA264_00625 at 137.332 kb on - strand, within CA264_00625 at 137.334 kb on - strand, within CA264_00625 at 137.339 kb on + strand, within CA264_00625 at 137.339 kb on + strand, within CA264_00625 at 137.340 kb on - strand, within CA264_00625 at 137.356 kb on + strand, within CA264_00625 at 137.494 kb on - strand, within CA264_00625 at 137.526 kb on + strand, within CA264_00625 at 137.536 kb on + strand, within CA264_00625 at 137.543 kb on - strand, within CA264_00625 at 137.624 kb on + strand, within CA264_00625 at 137.624 kb on + strand, within CA264_00625 at 137.638 kb on + strand, within CA264_00625 at 137.639 kb on - strand, within CA264_00625 at 137.639 kb on - strand, within CA264_00625
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 134,153 + +0.4 134,153 + +0.3 134,175 + CA264_00605 0.14 +0.6 134,216 + CA264_00605 0.32 -0.0 134,217 - CA264_00605 0.33 +1.1 134,219 + CA264_00605 0.34 -0.5 134,219 + CA264_00605 0.34 +0.3 134,220 - CA264_00605 0.34 -1.2 134,242 - CA264_00605 0.44 -1.5 134,262 + CA264_00605 0.53 +0.9 134,262 + CA264_00605 0.53 -0.5 134,311 - CA264_00605 0.75 -0.3 134,320 + CA264_00605 0.79 -0.4 134,321 - CA264_00605 0.79 -1.3 134,321 - CA264_00605 0.79 -0.3 134,363 + -0.4 134,364 - -1.0 134,364 - -2.0 134,414 + +0.0 134,414 + +0.6 134,421 + -0.0 134,435 - +0.0 134,442 - +0.6 134,447 + -0.0 134,448 - -0.8 134,455 - -0.4 134,461 - -0.1 134,691 + CA264_00610 0.49 +0.2 134,759 - CA264_00610 0.63 +0.4 134,793 + CA264_00610 0.70 -0.7 134,794 - CA264_00610 0.70 +1.1 134,843 + CA264_00610 0.80 +0.6 134,887 + CA264_00610 0.89 +0.7 134,888 - CA264_00610 0.89 +0.7 134,938 - -0.3 134,991 - -1.0 135,066 + +0.0 135,075 + -0.1 135,075 + -1.9 135,075 + -0.0 135,077 + +0.4 135,122 + -0.9 135,122 + -0.5 136,672 + -0.5 136,997 - -1.1 137,014 + +0.9 137,017 - -1.2 137,196 + +0.3 137,196 + -0.2 137,196 + -1.8 137,299 + CA264_00625 0.14 +0.1 137,332 - CA264_00625 0.16 +0.1 137,332 - CA264_00625 0.16 +2.8 137,334 - CA264_00625 0.17 +1.0 137,339 + CA264_00625 0.17 -0.6 137,339 + CA264_00625 0.17 +2.2 137,340 - CA264_00625 0.17 -1.1 137,356 + CA264_00625 0.18 -0.1 137,494 - CA264_00625 0.27 +0.4 137,526 + CA264_00625 0.29 +1.2 137,536 + CA264_00625 0.29 +0.2 137,543 - CA264_00625 0.30 +0.4 137,624 + CA264_00625 0.35 -1.3 137,624 + CA264_00625 0.35 +0.6 137,638 + CA264_00625 0.36 -0.4 137,639 - CA264_00625 0.36 +0.4 137,639 - CA264_00625 0.36 +0.7
Or see this region's nucleotide sequence