Experiment: Fumarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS04115 and ABIE41_RS04120 are separated by 222 nucleotides ABIE41_RS04120 and ABIE41_RS04125 are separated by 143 nucleotides
ABIE41_RS04115: ABIE41_RS04115 - ABC transporter ATP-binding protein/permease, at 849,213 to 851,021
_RS04115
ABIE41_RS04120: ABIE41_RS04120 - Crp/Fnr family transcriptional regulator, at 851,244 to 852,002
_RS04120
ABIE41_RS04125: ABIE41_RS04125 - methyltransferase domain-containing protein, at 852,146 to 852,940
_RS04125
Position (kb) 851
852
853 Strain fitness (log2 ratio) -2
-1
0
1
2 at 850.244 kb on - strand, within ABIE41_RS04115 at 850.244 kb on - strand, within ABIE41_RS04115 at 850.244 kb on - strand, within ABIE41_RS04115 at 850.244 kb on - strand, within ABIE41_RS04115 at 850.244 kb on - strand, within ABIE41_RS04115 at 850.368 kb on - strand, within ABIE41_RS04115 at 850.368 kb on - strand, within ABIE41_RS04115 at 850.396 kb on + strand, within ABIE41_RS04115 at 850.396 kb on + strand, within ABIE41_RS04115 at 850.397 kb on - strand, within ABIE41_RS04115 at 850.397 kb on - strand, within ABIE41_RS04115 at 850.424 kb on - strand, within ABIE41_RS04115 at 850.445 kb on + strand, within ABIE41_RS04115 at 850.445 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.447 kb on + strand, within ABIE41_RS04115 at 850.448 kb on - strand, within ABIE41_RS04115 at 850.448 kb on - strand, within ABIE41_RS04115 at 850.448 kb on - strand, within ABIE41_RS04115 at 850.448 kb on - strand, within ABIE41_RS04115 at 850.448 kb on - strand, within ABIE41_RS04115 at 850.654 kb on + strand, within ABIE41_RS04115 at 850.654 kb on + strand, within ABIE41_RS04115 at 850.657 kb on + strand, within ABIE41_RS04115 at 850.658 kb on - strand, within ABIE41_RS04115 at 850.658 kb on - strand, within ABIE41_RS04115 at 850.702 kb on + strand, within ABIE41_RS04115 at 850.703 kb on - strand, within ABIE41_RS04115 at 850.703 kb on - strand, within ABIE41_RS04115 at 851.191 kb on + strand at 851.191 kb on + strand at 851.191 kb on + strand at 851.191 kb on + strand at 851.191 kb on + strand at 851.191 kb on + strand at 851.192 kb on - strand at 851.192 kb on - strand at 851.192 kb on - strand at 851.192 kb on - strand at 851.192 kb on - strand at 851.192 kb on - strand at 851.259 kb on + strand at 851.433 kb on + strand, within ABIE41_RS04120 at 851.434 kb on - strand, within ABIE41_RS04120 at 851.434 kb on - strand, within ABIE41_RS04120 at 851.434 kb on - strand, within ABIE41_RS04120 at 851.434 kb on - strand, within ABIE41_RS04120 at 851.650 kb on - strand, within ABIE41_RS04120 at 851.650 kb on - strand, within ABIE41_RS04120 at 851.650 kb on - strand, within ABIE41_RS04120 at 851.967 kb on + strand at 851.968 kb on - strand at 852.081 kb on + strand at 852.082 kb on - strand at 852.094 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fumarate (C) remove 850,244 - ABIE41_RS04115 0.57 +0.3 850,244 - ABIE41_RS04115 0.57 +0.8 850,244 - ABIE41_RS04115 0.57 -1.2 850,244 - ABIE41_RS04115 0.57 +0.4 850,244 - ABIE41_RS04115 0.57 +0.5 850,368 - ABIE41_RS04115 0.64 +0.5 850,368 - ABIE41_RS04115 0.64 -1.2 850,396 + ABIE41_RS04115 0.65 -0.3 850,396 + ABIE41_RS04115 0.65 +0.3 850,397 - ABIE41_RS04115 0.65 +2.7 850,397 - ABIE41_RS04115 0.65 +0.9 850,424 - ABIE41_RS04115 0.67 +2.2 850,445 + ABIE41_RS04115 0.68 -0.4 850,445 + ABIE41_RS04115 0.68 -0.8 850,447 + ABIE41_RS04115 0.68 -1.0 850,447 + ABIE41_RS04115 0.68 +0.8 850,447 + ABIE41_RS04115 0.68 +0.7 850,447 + ABIE41_RS04115 0.68 -1.0 850,447 + ABIE41_RS04115 0.68 +0.1 850,447 + ABIE41_RS04115 0.68 -0.1 850,448 - ABIE41_RS04115 0.68 +2.2 850,448 - ABIE41_RS04115 0.68 +1.7 850,448 - ABIE41_RS04115 0.68 +0.4 850,448 - ABIE41_RS04115 0.68 -1.3 850,448 - ABIE41_RS04115 0.68 +2.1 850,654 + ABIE41_RS04115 0.80 -1.3 850,654 + ABIE41_RS04115 0.80 -0.6 850,657 + ABIE41_RS04115 0.80 -1.0 850,658 - ABIE41_RS04115 0.80 +1.8 850,658 - ABIE41_RS04115 0.80 +0.8 850,702 + ABIE41_RS04115 0.82 -0.7 850,703 - ABIE41_RS04115 0.82 -2.0 850,703 - ABIE41_RS04115 0.82 +0.1 851,191 + +0.5 851,191 + +0.2 851,191 + +1.2 851,191 + -2.7 851,191 + +0.7 851,191 + -1.3 851,192 - +0.8 851,192 - +0.5 851,192 - -1.6 851,192 - -0.6 851,192 - -1.8 851,192 - -0.7 851,259 + +0.2 851,433 + ABIE41_RS04120 0.25 -0.5 851,434 - ABIE41_RS04120 0.25 -1.1 851,434 - ABIE41_RS04120 0.25 -0.2 851,434 - ABIE41_RS04120 0.25 +0.9 851,434 - ABIE41_RS04120 0.25 +1.1 851,650 - ABIE41_RS04120 0.53 -0.2 851,650 - ABIE41_RS04120 0.53 +0.5 851,650 - ABIE41_RS04120 0.53 +0.1 851,967 + +0.8 851,968 - +0.0 852,081 + +0.9 852,082 - -0.3 852,094 + -2.5
Or see this region's nucleotide sequence