Strain Fitness in Escherichia coli BW25113 around b0075
Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | L-Fucose (C) |
---|---|---|---|---|---|
remove | |||||
82,624 | + | leuA | b0074 | 0.42 | -4.0 |
82,632 | - | leuA | b0074 | 0.43 | -4.3 |
82,635 | + | leuA | b0074 | 0.43 | -4.2 |
82,637 | + | leuA | b0074 | 0.43 | -3.6 |
82,638 | - | leuA | b0074 | 0.43 | -2.0 |
82,638 | - | leuA | b0074 | 0.43 | -2.3 |
82,647 | + | leuA | b0074 | 0.44 | -4.0 |
82,671 | - | leuA | b0074 | 0.45 | -3.3 |
82,671 | - | leuA | b0074 | 0.45 | -3.0 |
82,671 | - | leuA | b0074 | 0.45 | -2.7 |
82,713 | + | leuA | b0074 | 0.48 | -3.6 |
82,860 | + | leuA | b0074 | 0.57 | -1.2 |
82,860 | + | leuA | b0074 | 0.57 | -0.9 |
82,870 | + | leuA | b0074 | 0.58 | -4.1 |
82,878 | - | leuA | b0074 | 0.59 | -1.3 |
82,963 | + | leuA | b0074 | 0.64 | -3.3 |
83,006 | + | leuA | b0074 | 0.67 | -2.9 |
83,006 | + | leuA | b0074 | 0.67 | -3.5 |
83,006 | + | leuA | b0074 | 0.67 | -3.7 |
83,006 | + | leuA | b0074 | 0.67 | -2.3 |
83,006 | + | leuA | b0074 | 0.67 | -2.8 |
83,190 | - | leuA | b0074 | 0.78 | -2.6 |
83,360 | - | leuA | b0074 | 0.89 | -3.5 |
83,360 | - | leuA | b0074 | 0.89 | -3.4 |
83,465 | - | -2.9 | |||
83,465 | - | -2.2 | |||
83,470 | + | -3.3 | |||
83,486 | - | -4.3 | |||
83,525 | + | -4.4 | |||
83,525 | - | -3.8 | |||
83,547 | + | -3.0 | |||
83,557 | + | -2.9 | |||
83,561 | + | -4.9 | |||
83,610 | + | -3.3 | |||
83,619 | + | -3.4 | |||
83,620 | + | -1.8 | |||
83,620 | + | -3.0 | |||
83,620 | + | -1.9 | |||
83,622 | - | -3.0 | |||
83,625 | + | -2.2 | |||
83,627 | - | -4.0 | |||
83,627 | - | -4.1 | |||
83,627 | - | -2.4 | |||
83,627 | - | -4.0 | |||
83,635 | - | leuL | b0075 | 0.15 | -2.3 |
83,640 | + | leuL | b0075 | 0.21 | -2.7 |
83,640 | + | leuL | b0075 | 0.21 | -2.3 |
83,642 | + | leuL | b0075 | 0.23 | -2.4 |
83,642 | + | leuL | b0075 | 0.23 | -3.7 |
83,643 | - | leuL | b0075 | 0.24 | -2.9 |
83,643 | - | leuL | b0075 | 0.24 | -2.0 |
83,644 | + | leuL | b0075 | 0.25 | -3.4 |
83,645 | - | leuL | b0075 | 0.26 | -3.8 |
83,650 | - | leuL | b0075 | 0.32 | -3.7 |
83,650 | - | leuL | b0075 | 0.32 | -4.4 |
83,650 | - | leuL | b0075 | 0.32 | -4.3 |
83,650 | - | leuL | b0075 | 0.32 | -2.6 |
83,660 | - | leuL | b0075 | 0.44 | +0.5 |
83,660 | - | leuL | b0075 | 0.44 | -0.3 |
83,675 | + | leuL | b0075 | 0.61 | -3.5 |
83,675 | + | leuL | b0075 | 0.61 | -3.6 |
83,675 | + | leuL | b0075 | 0.61 | -2.5 |
83,675 | + | leuL | b0075 | 0.61 | -3.7 |
83,675 | + | leuL | b0075 | 0.61 | -2.6 |
83,675 | + | leuL | b0075 | 0.61 | -3.5 |
83,676 | - | leuL | b0075 | 0.62 | +0.4 |
83,683 | - | leuL | b0075 | 0.70 | +1.0 |
83,683 | - | leuL | b0075 | 0.70 | -0.3 |
83,683 | - | leuL | b0075 | 0.70 | -0.6 |
83,683 | - | leuL | b0075 | 0.70 | +0.3 |
83,683 | - | leuL | b0075 | 0.70 | +0.5 |
83,683 | - | leuL | b0075 | 0.70 | +0.9 |
83,683 | - | leuL | b0075 | 0.70 | +0.7 |
83,691 | - | leuL | b0075 | 0.79 | -1.0 |
83,691 | - | leuL | b0075 | 0.79 | +0.2 |
83,704 | - | +0.7 | |||
83,706 | - | -0.6 | |||
83,717 | + | -4.2 | |||
83,730 | + | -1.3 | |||
83,730 | + | -1.9 | |||
83,730 | - | -1.0 | |||
83,745 | - | -1.3 | |||
83,772 | + | -1.4 | |||
83,772 | + | -1.0 | |||
83,774 | - | -0.8 | |||
83,774 | - | -1.6 | |||
83,832 | + | -1.8 | |||
83,832 | + | -0.5 | |||
83,897 | + | -0.2 | |||
83,920 | + | +0.2 | |||
83,950 | + | +1.7 | |||
83,959 | + | -2.7 | |||
83,959 | + | +0.6 | |||
83,959 | + | +0.1 | |||
83,959 | + | -0.6 | |||
83,959 | + | -1.2 | |||
83,959 | + | +1.0 | |||
84,187 | + | -2.0 | |||
84,199 | + | +0.9 | |||
84,199 | + | -2.7 | |||
84,348 | + | -0.4 | |||
84,354 | - | -0.6 | |||
84,354 | - | -0.3 | |||
84,362 | - | -0.7 | |||
84,364 | - | -1.4 | |||
84,364 | - | -0.6 | |||
84,367 | - | +1.0 | |||
84,369 | - | +0.6 | |||
84,370 | + | -1.2 | |||
84,380 | + | -1.5 | |||
84,384 | - | +0.2 | |||
84,384 | - | -0.0 | |||
84,384 | - | -0.1 | |||
84,384 | - | -1.0 | |||
84,384 | - | -0.3 | |||
84,393 | - | -0.3 | |||
84,398 | - | -0.6 | |||
84,412 | - | -1.0 | |||
84,414 | + | -0.1 | |||
84,414 | + | -2.2 | |||
84,414 | + | +0.6 | |||
84,414 | + | -1.4 | |||
84,414 | - | +0.7 | |||
84,414 | - | -0.4 | |||
84,419 | + | -1.8 | |||
84,422 | - | -0.9 | |||
84,424 | + | +0.1 | |||
84,424 | + | -0.2 | |||
84,425 | + | -0.2 | |||
84,429 | - | -0.7 | |||
84,429 | - | -0.9 | |||
84,432 | - | -1.3 | |||
84,432 | - | -0.2 | |||
84,432 | - | -0.9 | |||
84,433 | - | -1.2 | |||
84,442 | - | -0.5 | |||
84,443 | - | +0.7 | |||
84,443 | - | -0.7 | |||
84,469 | - | leuO | b0076 | 0.11 | -0.9 |
84,480 | + | leuO | b0076 | 0.12 | -0.6 |
84,480 | + | leuO | b0076 | 0.12 | -1.5 |
84,480 | + | leuO | b0076 | 0.12 | -0.7 |
84,480 | + | leuO | b0076 | 0.12 | -0.3 |
84,484 | + | leuO | b0076 | 0.12 | +0.7 |
84,484 | + | leuO | b0076 | 0.12 | -0.3 |
84,486 | - | leuO | b0076 | 0.12 | -0.4 |
84,486 | - | leuO | b0076 | 0.12 | +0.4 |
84,488 | - | leuO | b0076 | 0.13 | -1.8 |
84,488 | - | leuO | b0076 | 0.13 | -0.3 |
84,488 | - | leuO | b0076 | 0.13 | -0.6 |
84,508 | - | leuO | b0076 | 0.15 | -0.6 |
84,515 | - | leuO | b0076 | 0.16 | +0.1 |
84,515 | - | leuO | b0076 | 0.16 | -0.3 |
84,531 | + | leuO | b0076 | 0.17 | +0.2 |
84,531 | + | leuO | b0076 | 0.17 | -0.9 |
84,534 | + | leuO | b0076 | 0.18 | -1.2 |
84,534 | - | leuO | b0076 | 0.18 | -2.4 |
84,534 | - | leuO | b0076 | 0.18 | -0.5 |
84,539 | - | leuO | b0076 | 0.18 | -1.1 |
84,544 | + | leuO | b0076 | 0.19 | +0.2 |
84,544 | - | leuO | b0076 | 0.19 | +0.8 |
84,552 | - | leuO | b0076 | 0.19 | -0.3 |
84,552 | - | leuO | b0076 | 0.19 | -2.2 |
84,556 | + | leuO | b0076 | 0.20 | -0.9 |
84,591 | + | leuO | b0076 | 0.24 | +0.4 |
84,591 | + | leuO | b0076 | 0.24 | -0.9 |
84,591 | + | leuO | b0076 | 0.24 | -1.1 |
84,593 | - | leuO | b0076 | 0.24 | -0.6 |
84,599 | - | leuO | b0076 | 0.24 | -0.3 |
84,603 | - | leuO | b0076 | 0.25 | -1.3 |
84,635 | + | leuO | b0076 | 0.28 | +0.5 |
84,635 | + | leuO | b0076 | 0.28 | +0.2 |
84,644 | - | leuO | b0076 | 0.29 | -0.8 |
84,648 | + | leuO | b0076 | 0.30 | -1.1 |
84,648 | + | leuO | b0076 | 0.30 | -0.2 |
84,648 | + | leuO | b0076 | 0.30 | -1.2 |
84,648 | + | leuO | b0076 | 0.30 | -0.7 |
84,658 | - | leuO | b0076 | 0.31 | +0.2 |
84,658 | - | leuO | b0076 | 0.31 | +0.8 |
84,671 | + | leuO | b0076 | 0.32 | -0.1 |
84,696 | + | leuO | b0076 | 0.35 | -0.2 |
84,696 | + | leuO | b0076 | 0.35 | +0.1 |
Or see this region's nucleotide sequence