Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_97 and PfGW456L13_98 are separated by 249 nucleotides PfGW456L13_98 and PfGW456L13_99 are separated by 90 nucleotides
PfGW456L13_97 - membrane protein, putative, at 112,560 to 113,573
_97
PfGW456L13_98 - Phosphate starvation-inducible protein psiF precursor, at 113,823 to 114,131
_98
PfGW456L13_99 - hypothetical protein, at 114,222 to 118,439
_99
Position (kb) 113
114
115 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 113.218 kb on + strand, within PfGW456L13_97 at 113.218 kb on + strand, within PfGW456L13_97 at 113.573 kb on + strand at 113.573 kb on + strand at 113.573 kb on + strand at 113.573 kb on + strand at 113.573 kb on + strand at 113.573 kb on + strand at 113.574 kb on - strand at 113.574 kb on - strand at 113.597 kb on - strand at 113.638 kb on - strand at 113.659 kb on + strand at 113.659 kb on + strand at 113.660 kb on - strand at 113.750 kb on + strand at 113.750 kb on + strand at 113.751 kb on - strand at 113.751 kb on - strand at 113.824 kb on + strand at 114.183 kb on + strand at 114.183 kb on + strand at 114.184 kb on - strand at 114.184 kb on - strand at 114.184 kb on - strand at 114.184 kb on - strand at 114.184 kb on - strand at 114.197 kb on + strand at 114.198 kb on - strand at 114.198 kb on - strand at 114.198 kb on - strand at 114.198 kb on - strand at 114.284 kb on - strand at 114.367 kb on + strand at 114.367 kb on + strand at 114.367 kb on + strand at 114.368 kb on - strand at 114.368 kb on - strand at 114.406 kb on + strand at 114.406 kb on + strand at 114.406 kb on + strand at 114.406 kb on + strand at 114.406 kb on + strand at 114.406 kb on + strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.407 kb on - strand at 114.421 kb on + strand at 114.422 kb on - strand at 114.422 kb on - strand at 114.422 kb on - strand at 114.422 kb on - strand at 114.422 kb on - strand at 114.433 kb on - strand at 114.438 kb on + strand at 114.438 kb on + strand at 114.507 kb on - strand at 114.507 kb on - strand at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.670 kb on + strand, within PfGW456L13_99 at 114.671 kb on - strand, within PfGW456L13_99 at 114.671 kb on - strand, within PfGW456L13_99 at 114.671 kb on - strand, within PfGW456L13_99 at 114.671 kb on - strand, within PfGW456L13_99 at 114.671 kb on - strand, within PfGW456L13_99 at 114.795 kb on - strand, within PfGW456L13_99 at 115.048 kb on + strand, within PfGW456L13_99 at 115.048 kb on + strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.049 kb on - strand, within PfGW456L13_99 at 115.120 kb on + strand at 115.121 kb on - strand, within PfGW456L13_99
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 113,218 + PfGW456L13_97 0.65 +1.2 113,218 + PfGW456L13_97 0.65 +0.1 113,573 + +2.1 113,573 + +0.0 113,573 + +1.5 113,573 + -0.5 113,573 + -0.5 113,573 + +0.5 113,574 - +2.1 113,574 - -1.4 113,597 - -0.7 113,638 - +0.1 113,659 + +0.1 113,659 + -0.9 113,660 - -1.3 113,750 + +0.1 113,750 + +1.3 113,751 - +0.4 113,751 - +0.4 113,824 + +2.1 114,183 + +1.1 114,183 + -1.4 114,184 - -0.2 114,184 - +1.7 114,184 - -1.0 114,184 - -0.5 114,184 - -1.0 114,197 + +0.1 114,198 - -0.5 114,198 - -0.7 114,198 - +0.1 114,198 - +0.7 114,284 - -1.0 114,367 + -0.2 114,367 + -0.1 114,367 + -1.1 114,368 - +0.3 114,368 - -0.7 114,406 + -0.4 114,406 + +0.5 114,406 + +0.8 114,406 + -0.3 114,406 + +0.9 114,406 + +0.3 114,407 - -0.8 114,407 - +0.5 114,407 - +0.2 114,407 - -0.2 114,407 - -1.8 114,407 - -2.0 114,407 - +0.6 114,421 + -0.3 114,422 - -0.5 114,422 - +1.6 114,422 - -0.1 114,422 - -0.1 114,422 - +0.3 114,433 - +0.1 114,438 + -0.9 114,438 + -2.6 114,507 - +0.4 114,507 - -0.4 114,670 + PfGW456L13_99 0.11 +0.8 114,670 + PfGW456L13_99 0.11 +0.2 114,670 + PfGW456L13_99 0.11 -1.2 114,670 + PfGW456L13_99 0.11 -0.6 114,670 + PfGW456L13_99 0.11 +0.9 114,670 + PfGW456L13_99 0.11 +1.2 114,670 + PfGW456L13_99 0.11 +0.9 114,670 + PfGW456L13_99 0.11 +0.4 114,670 + PfGW456L13_99 0.11 +0.9 114,670 + PfGW456L13_99 0.11 +0.7 114,671 - PfGW456L13_99 0.11 -0.3 114,671 - PfGW456L13_99 0.11 +0.0 114,671 - PfGW456L13_99 0.11 +0.5 114,671 - PfGW456L13_99 0.11 -0.2 114,671 - PfGW456L13_99 0.11 +0.2 114,795 - PfGW456L13_99 0.14 +1.9 115,048 + PfGW456L13_99 0.20 -0.2 115,048 + PfGW456L13_99 0.20 +1.1 115,049 - PfGW456L13_99 0.20 -1.1 115,049 - PfGW456L13_99 0.20 -2.8 115,049 - PfGW456L13_99 0.20 +0.5 115,049 - PfGW456L13_99 0.20 -0.1 115,049 - PfGW456L13_99 0.20 -0.2 115,049 - PfGW456L13_99 0.20 +0.4 115,049 - PfGW456L13_99 0.20 +0.1 115,120 + +0.1 115,121 - PfGW456L13_99 0.21 +0.9
Or see this region's nucleotide sequence