Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2897

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
3,234,967	+		PfGW456L13_2895	0.59	-0.6
3,234,967	+		PfGW456L13_2895	0.59	+1.7
3,234,967	+		PfGW456L13_2895	0.59	+0.3
3,234,967	+		PfGW456L13_2895	0.59	+0.2
3,234,967	+		PfGW456L13_2895	0.59	+0.6
3,234,967	+		PfGW456L13_2895	0.59	-1.9
3,234,967	+		PfGW456L13_2895	0.59	-1.2
3,234,967	+		PfGW456L13_2895	0.59	+1.0
3,234,967	+		PfGW456L13_2895	0.59	+0.5
3,234,967	+		PfGW456L13_2895	0.59	-3.5
3,234,967	+		PfGW456L13_2895	0.59	+0.3
3,234,967	+		PfGW456L13_2895	0.59	+1.3
3,234,967	+				+1.1
3,234,968	-		PfGW456L13_2895	0.59	-0.9
3,234,968	-		PfGW456L13_2895	0.59	-0.3
3,234,968	-		PfGW456L13_2895	0.59	+0.6
3,234,968	-		PfGW456L13_2895	0.59	-0.0
3,234,968	-		PfGW456L13_2895	0.59	-2.0
3,234,968	-		PfGW456L13_2895	0.59	+1.8
3,234,968	-		PfGW456L13_2895	0.59	+2.2
3,234,968	-		PfGW456L13_2895	0.59	+0.2
3,234,968	-		PfGW456L13_2895	0.59	+0.6
3,234,968	-		PfGW456L13_2895	0.59	-0.1
3,234,968	-		PfGW456L13_2895	0.59	+0.7
3,234,968	-		PfGW456L13_2895	0.59	+0.3
3,234,968	-		PfGW456L13_2895	0.59	+0.0
3,234,968	-		PfGW456L13_2895	0.59	+1.2
3,234,968	-		PfGW456L13_2895	0.59	+1.5
3,234,968	-		PfGW456L13_2895	0.59	+0.4
3,234,968	-		PfGW456L13_2895	0.59	+1.5
3,234,968	-		PfGW456L13_2895	0.59	+0.4
3,234,968	-				-0.2
3,234,968	-		PfGW456L13_2895	0.59	-0.9
3,234,969	+		PfGW456L13_2895	0.59	+1.1
3,234,969	+		PfGW456L13_2895	0.59	+0.7
3,234,970	-		PfGW456L13_2895	0.59	-1.0
3,234,970	-		PfGW456L13_2895	0.59	-0.4
3,235,051	+		PfGW456L13_2895	0.69	-0.1
3,235,077	-		PfGW456L13_2895	0.72	+0.5
3,235,180	+		PfGW456L13_2895	0.84	-1.0
3,235,180	+		PfGW456L13_2895	0.84	+0.2
3,235,180	+		PfGW456L13_2895	0.84	+0.3
3,235,180	+		PfGW456L13_2895	0.84	-0.4
3,235,180	+		PfGW456L13_2895	0.84	+0.4
3,235,180	+		PfGW456L13_2895	0.84	+0.1
3,235,181	-		PfGW456L13_2895	0.84	-1.4
3,235,181	-		PfGW456L13_2895	0.84	-1.8
3,235,181	-		PfGW456L13_2895	0.84	-2.2
3,235,181	-		PfGW456L13_2895	0.84	-0.8
3,235,181	-		PfGW456L13_2895	0.84	-0.7
3,235,181	-		PfGW456L13_2895	0.84	-0.4
3,235,193	+		PfGW456L13_2895	0.85	+0.9
3,235,300	-				+0.2
3,235,300	-				+0.6
3,235,347	+				+1.7
3,235,360	+				-1.1
3,235,360	+				+0.9
3,235,361	-				+0.7
3,235,361	-				+0.5
3,235,361	-				+0.2
3,235,398	-				+2.0
3,235,417	+				-2.4
3,235,418	-				+0.1
3,235,418	-				+0.8
3,235,418	-				+1.0
3,235,418	-				-1.3
3,235,442	+				+1.5
3,235,442	+				+0.1
3,235,443	-				-0.3
3,235,453	+		PfGW456L13_2896	0.12	-2.4
3,235,454	-		PfGW456L13_2896	0.13	-1.1
3,235,454	-		PfGW456L13_2896	0.13	+1.0
3,235,491	+		PfGW456L13_2896	0.25	+0.3
3,235,492	-		PfGW456L13_2896	0.25	+0.1
3,235,686	+		PfGW456L13_2896	0.89	+0.1
3,235,686	+		PfGW456L13_2896	0.89	-0.7
3,235,686	+		PfGW456L13_2896	0.89	-1.2
3,235,686	+		PfGW456L13_2896	0.89	-0.4
3,235,687	-		PfGW456L13_2896	0.89	+0.1
3,235,687	-		PfGW456L13_2896	0.89	+0.2
3,235,687	-		PfGW456L13_2896	0.89	-0.5
3,235,724	+				-1.0
3,235,725	-				+0.8
3,235,725	-				-1.1
3,235,725	-				+0.8
3,235,725	-				-0.9
3,235,725	-				+0.6
3,235,807	+				+0.4
3,235,807	+				-0.5
3,235,807	+				-1.0
3,235,807	+				-2.2
3,235,808	-				-0.9
3,235,813	+				+0.8
3,235,816	-				-2.4
3,235,816	-				-2.7
3,235,816	-				-1.1
3,235,904	+				-0.6
3,235,904	+				-0.6
3,235,904	+				+0.3
3,235,905	-				-2.2
3,235,909	+				-0.3
3,235,909	+				-0.6
3,235,909	+				-0.2
3,235,910	-				-0.2
3,235,910	-				-1.5
3,235,945	-		PfGW456L13_2897	0.32	-1.4
3,235,945	-		PfGW456L13_2897	0.32	-2.0
3,235,945	-		PfGW456L13_2897	0.32	-0.0
3,236,009	-		PfGW456L13_2897	0.89	-1.5
3,236,033	+				+2.2
3,236,045	-				-0.1
3,236,053	+				-1.4
3,236,053	+				+0.9
3,236,053	+				+0.5
3,236,053	+				+1.9
3,236,054	-				+0.7
3,236,054	-				-0.3
3,236,088	+				-0.4
3,236,088	+				-1.6
3,236,088	+				+0.3
3,236,089	-				+0.9
3,236,089	-				-1.0
3,236,143	+				-0.4
3,236,143	+				-1.2
3,236,143	+				-0.7
3,236,143	+				-0.2
3,236,144	-				-0.2
3,236,144	-				+0.4
3,236,144	-				-2.2
3,236,144	-				-1.4
3,236,165	-				+0.8
3,236,171	+				+0.6
3,236,171	+				-0.5
3,236,171	+				+0.8
3,236,172	-				+1.5
3,236,216	+				+0.1
3,236,216	+				+0.1
3,236,216	+				+0.4
3,236,216	+				-0.0
3,236,217	-				+0.8
3,236,217	-				-2.1
3,236,217	-				+0.3
3,236,217	-				+0.0
3,236,217	-				-0.7
3,236,218	+				+1.3
3,236,218	+				+2.2
3,236,219	-				+0.1
3,236,219	-				+0.6
3,236,219	-				+0.1
3,236,219	-				+0.8
3,236,219	-				-1.6
3,236,219	-				-1.0
3,236,245	+				+0.9
3,236,245	+				+1.0
3,236,245	+				-3.5
3,236,245	+				+1.6
3,236,246	-				+1.5
3,236,246	-				+0.5
3,236,246	-				-0.3
3,236,246	-				-0.3
3,236,437	+		PfGW456L13_2898	0.17	-1.6
3,236,438	-		PfGW456L13_2898	0.17	-0.1
3,236,475	+		PfGW456L13_2898	0.21	+1.9
3,236,476	-		PfGW456L13_2898	0.21	-0.4
3,236,476	-		PfGW456L13_2898	0.21	-0.2
3,236,476	-		PfGW456L13_2898	0.21	+0.9
3,236,476	-		PfGW456L13_2898	0.21	+1.3
3,236,560	+		PfGW456L13_2898	0.30	-0.9
3,236,602	+		PfGW456L13_2898	0.34	-1.2
3,236,637	+		PfGW456L13_2898	0.38	+0.5
3,236,686	+		PfGW456L13_2898	0.43	-1.7
3,236,686	+				-0.8
3,236,686	+				+0.4
3,236,686	+		PfGW456L13_2898	0.43	+0.4
3,236,686	+		PfGW456L13_2898	0.43	-0.5
3,236,686	+		PfGW456L13_2898	0.43	+0.4
3,236,686	+		PfGW456L13_2898	0.43	-0.7
3,236,686	+		PfGW456L13_2898	0.43	+0.8
3,236,687	-		PfGW456L13_2898	0.43	-0.4
3,236,687	-		PfGW456L13_2898	0.43	-1.2
3,236,687	-		PfGW456L13_2898	0.43	+0.1
3,236,687	-		PfGW456L13_2898	0.43	+0.3
3,236,687	-		PfGW456L13_2898	0.43	+0.6
3,236,687	-		PfGW456L13_2898	0.43	+0.8
3,237,014	+		PfGW456L13_2898	0.78	-0.3