Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2148 and PfGW456L13_2149 are separated by 64 nucleotides PfGW456L13_2149 and PfGW456L13_2150 are separated by 154 nucleotides PfGW456L13_2150 and PfGW456L13_2151 are separated by 5 nucleotides PfGW456L13_2151 and PfGW456L13_2152 are separated by 201 nucleotides
PfGW456L13_2148 - Oxidoreductase, short chain dehydrogenase/reductase family, at 2,350,267 to 2,351,082
_2148
PfGW456L13_2149 - Protein of unknown function UPF0060, at 2,351,147 to 2,351,479
_2149
PfGW456L13_2150 - Carbon storage regulator, at 2,351,634 to 2,351,819
_2150
PfGW456L13_2151 - FIG00953242: hypothetical protein, at 2,351,825 to 2,352,052
_2151
PfGW456L13_2152 - Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6), at 2,352,254 to 2,353,444
_2152
Position (kb)
2351
2352 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2350.714 kb on + strand, within PfGW456L13_2148 at 2350.714 kb on + strand, within PfGW456L13_2148 at 2350.714 kb on + strand, within PfGW456L13_2148 at 2350.714 kb on + strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.715 kb on - strand, within PfGW456L13_2148 at 2350.921 kb on + strand, within PfGW456L13_2148 at 2350.921 kb on + strand, within PfGW456L13_2148 at 2350.921 kb on + strand, within PfGW456L13_2148 at 2350.921 kb on + strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.922 kb on - strand, within PfGW456L13_2148 at 2350.927 kb on + strand, within PfGW456L13_2148 at 2350.927 kb on + strand, within PfGW456L13_2148 at 2350.927 kb on + strand, within PfGW456L13_2148 at 2350.927 kb on + strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2350.928 kb on - strand, within PfGW456L13_2148 at 2351.020 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.152 kb on + strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.153 kb on - strand at 2351.156 kb on + strand at 2351.156 kb on + strand at 2351.156 kb on + strand at 2351.156 kb on + strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.157 kb on - strand at 2351.230 kb on + strand, within PfGW456L13_2149 at 2351.231 kb on - strand, within PfGW456L13_2149 at 2351.309 kb on + strand, within PfGW456L13_2149 at 2351.309 kb on + strand, within PfGW456L13_2149 at 2351.309 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.345 kb on + strand, within PfGW456L13_2149 at 2351.346 kb on - strand, within PfGW456L13_2149 at 2351.346 kb on - strand, within PfGW456L13_2149 at 2351.346 kb on - strand, within PfGW456L13_2149 at 2351.346 kb on - strand, within PfGW456L13_2149 at 2351.346 kb on - strand, within PfGW456L13_2149 at 2351.491 kb on + strand at 2351.492 kb on - strand at 2351.492 kb on - strand at 2351.492 kb on - strand at 2351.521 kb on + strand at 2351.521 kb on + strand at 2351.522 kb on - strand at 2351.576 kb on + strand at 2351.576 kb on + strand at 2351.576 kb on + strand at 2351.576 kb on + strand at 2351.576 kb on + strand at 2351.576 kb on + strand at 2351.577 kb on - strand at 2351.577 kb on - strand at 2351.577 kb on - strand at 2351.577 kb on - strand at 2351.641 kb on + strand at 2351.641 kb on + strand at 2351.641 kb on + strand at 2351.642 kb on - strand at 2351.642 kb on - strand at 2351.642 kb on - strand at 2351.775 kb on + strand, within PfGW456L13_2150 at 2351.776 kb on - strand, within PfGW456L13_2150 at 2351.776 kb on - strand, within PfGW456L13_2150 at 2352.052 kb on + strand at 2352.052 kb on + strand at 2352.053 kb on - strand at 2352.053 kb on - strand at 2352.228 kb on + strand at 2352.228 kb on + strand at 2352.228 kb on + strand at 2352.230 kb on + strand at 2352.230 kb on + strand at 2352.230 kb on + strand at 2352.230 kb on + strand at 2352.231 kb on - strand at 2352.231 kb on - strand at 2352.231 kb on - strand at 2352.231 kb on - strand at 2352.231 kb on - strand at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.408 kb on + strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.409 kb on - strand, within PfGW456L13_2152 at 2352.549 kb on + strand, within PfGW456L13_2152 at 2352.550 kb on - strand, within PfGW456L13_2152 at 2352.552 kb on + strand, within PfGW456L13_2152 at 2352.553 kb on - strand, within PfGW456L13_2152 at 2352.624 kb on + strand, within PfGW456L13_2152 at 2352.624 kb on + strand, within PfGW456L13_2152 at 2352.624 kb on + strand, within PfGW456L13_2152 at 2352.624 kb on + strand, within PfGW456L13_2152 at 2352.624 kb on + strand, within PfGW456L13_2152 at 2352.625 kb on - strand, within PfGW456L13_2152 at 2352.625 kb on - strand, within PfGW456L13_2152 at 2352.625 kb on - strand, within PfGW456L13_2152
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 2,350,714 + PfGW456L13_2148 0.55 +0.4 2,350,714 + PfGW456L13_2148 0.55 -1.0 2,350,714 + PfGW456L13_2148 0.55 -0.7 2,350,714 + PfGW456L13_2148 0.55 -0.5 2,350,715 - PfGW456L13_2148 0.55 -2.6 2,350,715 - PfGW456L13_2148 0.55 -0.2 2,350,715 - -1.1 2,350,715 - PfGW456L13_2148 0.55 +1.7 2,350,715 - PfGW456L13_2148 0.55 +0.7 2,350,715 - PfGW456L13_2148 0.55 +0.1 2,350,715 - PfGW456L13_2148 0.55 -0.1 2,350,715 - PfGW456L13_2148 0.55 +1.0 2,350,921 + PfGW456L13_2148 0.80 -0.8 2,350,921 + PfGW456L13_2148 0.80 -1.4 2,350,921 + PfGW456L13_2148 0.80 +0.7 2,350,921 + PfGW456L13_2148 0.80 -0.3 2,350,922 - PfGW456L13_2148 0.80 +0.2 2,350,922 - PfGW456L13_2148 0.80 -0.7 2,350,922 - PfGW456L13_2148 0.80 +0.0 2,350,922 - PfGW456L13_2148 0.80 -3.1 2,350,922 - PfGW456L13_2148 0.80 +0.3 2,350,922 - PfGW456L13_2148 0.80 -0.3 2,350,927 + PfGW456L13_2148 0.81 -2.0 2,350,927 + PfGW456L13_2148 0.81 +0.8 2,350,927 + PfGW456L13_2148 0.81 +0.6 2,350,927 + PfGW456L13_2148 0.81 +0.3 2,350,928 - PfGW456L13_2148 0.81 -0.3 2,350,928 - PfGW456L13_2148 0.81 +0.6 2,350,928 - PfGW456L13_2148 0.81 -0.2 2,350,928 - PfGW456L13_2148 0.81 -0.1 2,350,928 - PfGW456L13_2148 0.81 +1.0 2,350,928 - PfGW456L13_2148 0.81 -1.4 2,350,928 - PfGW456L13_2148 0.81 -0.6 2,350,928 - PfGW456L13_2148 0.81 -0.1 2,350,928 - PfGW456L13_2148 0.81 +0.8 2,351,020 + -0.7 2,351,152 + +0.8 2,351,152 + -0.1 2,351,152 + -0.1 2,351,152 + +0.9 2,351,152 + -0.5 2,351,152 + +1.6 2,351,152 + +0.7 2,351,152 + +0.4 2,351,153 - +0.3 2,351,153 - +1.9 2,351,153 - -1.4 2,351,153 - -2.4 2,351,153 - -0.3 2,351,153 - +0.5 2,351,153 - -2.9 2,351,156 + -0.5 2,351,156 + -0.4 2,351,156 + -0.5 2,351,156 + +1.2 2,351,157 - -1.0 2,351,157 - -0.1 2,351,157 - +0.9 2,351,157 - -0.7 2,351,157 - -0.4 2,351,157 - -0.8 2,351,157 - -0.1 2,351,157 - +0.1 2,351,230 + PfGW456L13_2149 0.25 +0.1 2,351,231 - PfGW456L13_2149 0.25 -0.8 2,351,309 + PfGW456L13_2149 0.49 -2.1 2,351,309 + PfGW456L13_2149 0.49 -0.3 2,351,309 + PfGW456L13_2149 0.49 +0.2 2,351,345 + PfGW456L13_2149 0.59 -0.5 2,351,345 + PfGW456L13_2149 0.59 +0.8 2,351,345 + PfGW456L13_2149 0.59 -0.0 2,351,345 + PfGW456L13_2149 0.59 +0.0 2,351,345 + PfGW456L13_2149 0.59 +1.0 2,351,345 + PfGW456L13_2149 0.59 +0.6 2,351,345 + PfGW456L13_2149 0.59 +0.3 2,351,345 + PfGW456L13_2149 0.59 +0.4 2,351,345 + PfGW456L13_2149 0.59 -1.2 2,351,345 + PfGW456L13_2149 0.59 +0.8 2,351,345 + PfGW456L13_2149 0.59 +0.4 2,351,345 + PfGW456L13_2149 0.59 +0.4 2,351,345 + PfGW456L13_2149 0.59 +0.5 2,351,345 + PfGW456L13_2149 0.59 -0.0 2,351,345 + PfGW456L13_2149 0.59 -0.1 2,351,346 - PfGW456L13_2149 0.60 +0.3 2,351,346 - PfGW456L13_2149 0.60 -0.2 2,351,346 - PfGW456L13_2149 0.60 -0.2 2,351,346 - PfGW456L13_2149 0.60 -2.4 2,351,346 - PfGW456L13_2149 0.60 -3.1 2,351,491 + -0.1 2,351,492 - -0.6 2,351,492 - +0.7 2,351,492 - +0.7 2,351,521 + +1.1 2,351,521 + +1.9 2,351,522 - -0.4 2,351,576 + +0.1 2,351,576 + +1.6 2,351,576 + +0.4 2,351,576 + +0.3 2,351,576 + -1.8 2,351,576 + +0.6 2,351,577 - -0.2 2,351,577 - -0.2 2,351,577 - -1.9 2,351,577 - +0.7 2,351,641 + -0.1 2,351,641 + -0.9 2,351,641 + +0.5 2,351,642 - -1.2 2,351,642 - -1.6 2,351,642 - -0.1 2,351,775 + PfGW456L13_2150 0.76 -0.8 2,351,776 - PfGW456L13_2150 0.76 -2.6 2,351,776 - PfGW456L13_2150 0.76 -0.3 2,352,052 + +0.1 2,352,052 + +0.8 2,352,053 - -1.0 2,352,053 - +0.6 2,352,228 + -0.2 2,352,228 + +0.3 2,352,228 + -0.9 2,352,230 + -0.8 2,352,230 + +0.8 2,352,230 + +0.3 2,352,230 + -0.4 2,352,231 - +0.0 2,352,231 - -0.5 2,352,231 - +1.0 2,352,231 - +0.2 2,352,231 - -0.2 2,352,408 + PfGW456L13_2152 0.13 +1.2 2,352,408 + PfGW456L13_2152 0.13 +0.4 2,352,408 + PfGW456L13_2152 0.13 -1.3 2,352,408 + PfGW456L13_2152 0.13 +0.1 2,352,408 + PfGW456L13_2152 0.13 +1.0 2,352,408 + PfGW456L13_2152 0.13 -0.6 2,352,408 + PfGW456L13_2152 0.13 +1.7 2,352,408 + PfGW456L13_2152 0.13 -0.1 2,352,408 + PfGW456L13_2152 0.13 +0.4 2,352,408 + PfGW456L13_2152 0.13 -2.9 2,352,408 + PfGW456L13_2152 0.13 -2.3 2,352,408 + PfGW456L13_2152 0.13 +0.8 2,352,408 + PfGW456L13_2152 0.13 +0.5 2,352,408 + PfGW456L13_2152 0.13 +0.9 2,352,408 + PfGW456L13_2152 0.13 +0.3 2,352,408 + PfGW456L13_2152 0.13 +0.1 2,352,408 + PfGW456L13_2152 0.13 -0.5 2,352,408 + PfGW456L13_2152 0.13 +0.1 2,352,408 + PfGW456L13_2152 0.13 -0.0 2,352,408 + PfGW456L13_2152 0.13 +0.5 2,352,408 + PfGW456L13_2152 0.13 -1.3 2,352,408 + -0.7 2,352,408 + PfGW456L13_2152 0.13 -1.0 2,352,408 + PfGW456L13_2152 0.13 +0.7 2,352,408 + PfGW456L13_2152 0.13 -0.1 2,352,408 + PfGW456L13_2152 0.13 -1.2 2,352,408 + PfGW456L13_2152 0.13 +0.1 2,352,408 + PfGW456L13_2152 0.13 -0.3 2,352,409 - PfGW456L13_2152 0.13 +0.3 2,352,409 - PfGW456L13_2152 0.13 -0.4 2,352,409 - PfGW456L13_2152 0.13 -0.0 2,352,409 - PfGW456L13_2152 0.13 +0.1 2,352,409 - PfGW456L13_2152 0.13 -0.7 2,352,409 - PfGW456L13_2152 0.13 -0.1 2,352,409 - PfGW456L13_2152 0.13 -1.4 2,352,409 - PfGW456L13_2152 0.13 -0.2 2,352,409 - PfGW456L13_2152 0.13 +0.5 2,352,409 - PfGW456L13_2152 0.13 +1.1 2,352,409 - PfGW456L13_2152 0.13 +1.6 2,352,409 - PfGW456L13_2152 0.13 +0.7 2,352,409 - PfGW456L13_2152 0.13 +0.5 2,352,409 - PfGW456L13_2152 0.13 +1.4 2,352,409 - PfGW456L13_2152 0.13 +0.3 2,352,409 - PfGW456L13_2152 0.13 +0.7 2,352,409 - PfGW456L13_2152 0.13 +0.6 2,352,409 - PfGW456L13_2152 0.13 -0.2 2,352,409 - PfGW456L13_2152 0.13 -0.2 2,352,409 - PfGW456L13_2152 0.13 +0.1 2,352,409 - PfGW456L13_2152 0.13 +0.4 2,352,409 - PfGW456L13_2152 0.13 +0.1 2,352,409 - PfGW456L13_2152 0.13 -1.1 2,352,409 - PfGW456L13_2152 0.13 +0.4 2,352,409 - PfGW456L13_2152 0.13 +0.6 2,352,409 - PfGW456L13_2152 0.13 -2.3 2,352,409 - PfGW456L13_2152 0.13 +0.5 2,352,409 - PfGW456L13_2152 0.13 -0.3 2,352,409 - PfGW456L13_2152 0.13 +1.4 2,352,409 - PfGW456L13_2152 0.13 +0.6 2,352,409 - PfGW456L13_2152 0.13 -0.6 2,352,409 - PfGW456L13_2152 0.13 -0.7 2,352,409 - PfGW456L13_2152 0.13 -0.7 2,352,409 - PfGW456L13_2152 0.13 +0.8 2,352,409 - PfGW456L13_2152 0.13 -0.9 2,352,409 - PfGW456L13_2152 0.13 +0.4 2,352,409 - PfGW456L13_2152 0.13 +0.0 2,352,549 + PfGW456L13_2152 0.25 -1.6 2,352,550 - PfGW456L13_2152 0.25 -3.3 2,352,552 + PfGW456L13_2152 0.25 +0.5 2,352,553 - PfGW456L13_2152 0.25 -1.0 2,352,624 + PfGW456L13_2152 0.31 -0.8 2,352,624 + PfGW456L13_2152 0.31 +0.6 2,352,624 + PfGW456L13_2152 0.31 -0.7 2,352,624 + PfGW456L13_2152 0.31 -1.0 2,352,624 + PfGW456L13_2152 0.31 -0.3 2,352,625 - PfGW456L13_2152 0.31 +0.1 2,352,625 - PfGW456L13_2152 0.31 -1.2 2,352,625 - PfGW456L13_2152 0.31 -1.4
Or see this region's nucleotide sequence